Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001284756.1 | Gene: | sdk / 31017 | FlyBaseID: | FBgn0021764 | Length: | 2265 | Species: | Drosophila melanogaster |
Alignment Length: | 1930 | Identity: | 413/1930 - (21%) |
---|---|---|---|
Similarity: | 666/1930 - (34%) | Gaps: | 568/1930 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 215 FSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRTTQKPVME-IHVERGNDVHLPCNIQGNPFPIF 278
Fly 279 TWYR----VSD--SAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFG---------- 327
Fly 328 -------EQRIEIRLSV-NSYVSVHILPQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQAN 384
Fly 385 NALTTGRDNIRFLSKSSLLVQNVGRRDRGVYQCLVENQ---RASAQAMAELKL-GD----TVPEL 441
Fly 442 IYTFIEQNVRPGP-LISLKCSASGSPPPQF--AWLLDSQPIMDVSLHHRFAIGQFVDMSGD---- 499
Fly 500 --VISHLNISHVRPDDGGLYKC---VASNSMGSVQHSARLNVYGPPYVRAIGPIKAVA----GED 555
Fly 556 IIVHCPFAGYPVEQIRWEK------AHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIV 614
Fly 615 RSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSL 679
Fly 680 QITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNT 744
Fly 745 ISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMR-----NHSLLLNLATDNDEGYYMCQATNEIG 804
Fly 805 -----AGLKKTIRINVNEPARFEQSARNISSRRNDPV----------TLDCHAKGDE--PITIGW 852
Fly 853 ---------TQNNGRIDLNNFRFSIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQI 908
Fly 909 IFLAVQERPDTPSHLEIF---EVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHGSLAAAG 970
Fly 971 GDWNGHVINVSLPSTSISRSYDSDLRESAIVAGLTPATTFLIRMQAINEI-ERSAYTEAIVLKTQ 1034
Fly 1035 EEAPTEAPSNVQVQTGGESELIVTWQIPPRESWNGELIGYTV--------NCSEEKQNINFISVV 1091
Fly 1092 NSSLKSTIVSGWATTKATLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVNC 1156
Fly 1157 TALSSQSLKISWLEPPLQFHGGIIQGYKIL----------YRPIVHQIDFPAKLEIKRTSNLETY 1211
Fly 1212 LHTLHKASNYSIRVLAYTATGDGLASHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRN 1276
Fly 1277 GIISHYTVYSREAGRKGQAKTHMVRVDENGYPVTFESRSLAENQM-----YEFWVSASTSVGEGE 1336
Fly 1337 PTS---------VIAQATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRARWLTRDRPVT 1392
Fly 1393 FSPFYEVTNEGNLKI--HRVEGSLSGNYT----C-------------------------TANNLF 1426
Fly 1427 GSDE-----IQYQVIAMKPPSAP-QIIVQYASADSIRVSWDAPDDGGAPLQ---------GYTIS 1476
Fly 1477 YHTAGESWSITELLPEN--------NAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGK 1533
Fly 1534 ASQAPNANEL-IATNATCVNLKLSSWQNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEENRENL 1597
Fly 1598 IFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDGITIPPPSVFPSENDLMNNLINSTNPTSG 1662
Fly 1663 DWFATLIVV---VIITVSIITIALTIKHRRTLCGP---IAEGYESRTLPGDYKEDHENRRNQQVY 1721
Fly 1722 SASPVKTVDKGNESEMYEISPYATFSVNGGRTGAPAKTPTRAVAAQTPLDYTMQFKTFGHPEGEN 1786
Fly 1787 LNATAYPLLPSSGFGH---VKSKSSWHK---QRYYNTED-ESTLSKSMTIVAGSQAGHSKKSNGG 1844
Fly 1845 RSAKSSAACSGVVAGSESDTSISPSTE-FSNMPTYRVPCKSSRSSDGR--AVVDMFRPDSST--- 1903
Fly 1904 -------------ESNNDQGSPAPERRHNTPRHVLGMGMAMGLGG 1935 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | 29/114 (25%) | ||
Ig | 264..334 | CDD:143165 | 21/92 (23%) | ||
I-set | 345..433 | CDD:254352 | 11/90 (12%) | ||
Ig | 358..431 | CDD:143165 | 10/75 (13%) | ||
Ig | 456..533 | CDD:143165 | 18/87 (21%) | ||
IGc2 | 553..619 | CDD:197706 | 18/71 (25%) | ||
I-set | 634..724 | CDD:254352 | 10/89 (11%) | ||
ig | 645..712 | CDD:278476 | 6/66 (9%) | ||
IG_like | 734..815 | CDD:214653 | 25/90 (28%) | ||
Ig | 745..815 | CDD:299845 | 23/79 (29%) | ||
I-set | 820..913 | CDD:254352 | 23/113 (20%) | ||
Ig | 838..920 | CDD:299845 | 23/92 (25%) | ||
FN3 | 917..1033 | CDD:238020 | 30/119 (25%) | ||
FN3 | 1040..1142 | CDD:238020 | 26/109 (24%) | ||
fn3 | 1150..1237 | CDD:278470 | 29/96 (30%) | ||
FN3 | 1263..1345 | CDD:238020 | 24/95 (25%) | ||
Ig | 1350..1436 | CDD:299845 | 19/121 (16%) | ||
IG_like | 1358..1436 | CDD:214653 | 17/113 (15%) | ||
FN3 | 1441..1530 | CDD:238020 | 27/106 (25%) | ||
FN3 | 1542..1620 | CDD:238020 | 6/78 (8%) | ||
sdk | NP_001284756.1 | Ig | 71..157 | CDD:299845 | 26/100 (26%) |
I-set | 72..150 | CDD:254352 | 25/92 (27%) | ||
Ig | 172..245 | CDD:299845 | 11/94 (12%) | ||
IG_like | 280..356 | CDD:214653 | 21/89 (24%) | ||
Ig | 280..343 | CDD:299845 | 15/76 (20%) | ||
IG_like | 375..450 | CDD:214653 | 22/82 (27%) | ||
Ig | 378..447 | CDD:143165 | 20/76 (26%) | ||
Ig | 506..587 | CDD:299845 | 24/84 (29%) | ||
IG_like | 506..587 | CDD:214653 | 24/84 (29%) | ||
I-set | 592..682 | CDD:254352 | 24/119 (20%) | ||
Ig | 595..682 | CDD:299845 | 24/116 (21%) | ||
FN3 | 686..789 | CDD:238020 | 29/117 (25%) | ||
FN3 | 798..893 | CDD:238020 | 26/109 (24%) | ||
FN3 | 901..1005 | CDD:238020 | 31/103 (30%) | ||
fn3 | 1011..1094 | CDD:278470 | 23/91 (25%) | ||
FN3 | 1108..1202 | CDD:238020 | 20/128 (16%) | ||
FN3 | 1210..1308 | CDD:238020 | 27/107 (25%) | ||
fn3 | 1317..1402 | CDD:278470 | 20/153 (13%) | ||
FN3 | 1415..1507 | CDD:238020 | 20/120 (17%) | ||
FN3 | 1513..1608 | CDD:238020 | 18/120 (15%) | ||
fn3 | 1617..1708 | CDD:278470 | 2/3 (67%) | ||
FN3 | 1722..1823 | CDD:238020 | |||
FN3 | 1828..1920 | CDD:238020 | |||
FN3 | 1927..2016 | CDD:238020 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 46 | 1.000 | Domainoid score | I8189 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |