Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_218634.5 | Gene: | Iglon5 / 308557 | RGDID: | 1305344 | Length: | 336 | Species: | Rattus norvegicus |
Alignment Length: | 441 | Identity: | 84/441 - (19%) |
---|---|---|---|
Similarity: | 131/441 - (29%) | Gaps: | 167/441 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 282 RVSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFGEQRIEIRLSVNSYVSVHIL 346
Fly 347 PQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNIRFL----SKSSLLVQNV 407
Fly 408 GRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQ-NVRPGPLISLKCSASGSPPPQFA 471
Fly 472 WLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSAR--L 534
Fly 535 NVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIK 599
Fly 600 NVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPI 664
Fly 665 YFSWKKDDSSIPS----SLQITEKKEEFYSLLVFKDISARHSGKYTCYASN 711 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | 12/54 (22%) | ||
Ig | 264..334 | CDD:143165 | 12/51 (24%) | ||
I-set | 345..433 | CDD:254352 | 16/91 (18%) | ||
Ig | 358..431 | CDD:143165 | 16/76 (21%) | ||
Ig | 456..533 | CDD:143165 | 20/76 (26%) | ||
IGc2 | 553..619 | CDD:197706 | 3/65 (5%) | ||
I-set | 634..724 | CDD:254352 | 22/82 (27%) | ||
ig | 645..712 | CDD:278476 | 22/71 (31%) | ||
IG_like | 734..815 | CDD:214653 | |||
Ig | 745..815 | CDD:299845 | |||
I-set | 820..913 | CDD:254352 | |||
Ig | 838..920 | CDD:299845 | |||
FN3 | 917..1033 | CDD:238020 | |||
FN3 | 1040..1142 | CDD:238020 | |||
fn3 | 1150..1237 | CDD:278470 | |||
FN3 | 1263..1345 | CDD:238020 | |||
Ig | 1350..1436 | CDD:299845 | |||
IG_like | 1358..1436 | CDD:214653 | |||
FN3 | 1441..1530 | CDD:238020 | |||
FN3 | 1542..1620 | CDD:238020 | |||
Iglon5 | XP_218634.5 | Ig | 41..129 | CDD:416386 | 20/125 (16%) |
Ig strand A' | 41..46 | CDD:409353 | 0/8 (0%) | ||
Ig strand B | 48..56 | CDD:409353 | 1/17 (6%) | ||
CDR1 | 56..60 | CDD:409353 | 1/27 (4%) | ||
FR2 | 61..68 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 61..67 | CDD:409353 | 1/5 (20%) | ||
CDR2 | 69..79 | CDD:409353 | 3/9 (33%) | ||
Ig strand C' | 71..74 | CDD:409353 | 1/2 (50%) | ||
Ig strand C' | 76..79 | CDD:409353 | 1/2 (50%) | ||
FR3 | 80..115 | CDD:409353 | 11/34 (32%) | ||
Ig strand D | 84..91 | CDD:409353 | 2/6 (33%) | ||
Ig strand E | 94..100 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 107..115 | CDD:409353 | 3/7 (43%) | ||
CDR3 | 116..120 | CDD:409353 | 0/3 (0%) | ||
Ig strand G | 120..129 | CDD:409353 | 1/8 (13%) | ||
FR4 | 122..129 | CDD:409353 | 1/6 (17%) | ||
Ig strand A | 132..137 | CDD:409353 | 2/4 (50%) | ||
Ig_3 | 134..199 | CDD:404760 | 20/82 (24%) | ||
Ig strand A' | 140..145 | CDD:409353 | 0/4 (0%) | ||
Ig strand B | 148..157 | CDD:409353 | 2/8 (25%) | ||
Ig strand C | 163..167 | CDD:409353 | 0/3 (0%) | ||
Ig strand D | 174..177 | CDD:409353 | 0/8 (0%) | ||
Ig strand E | 178..183 | CDD:409353 | 1/7 (14%) | ||
Ig strand F | 191..199 | CDD:409353 | 4/7 (57%) | ||
Ig_3 | 217..295 | CDD:404760 | 26/175 (15%) | ||
putative Ig strand A | 218..224 | CDD:409353 | 1/5 (20%) | ||
Ig strand B | 234..238 | CDD:409353 | 0/3 (0%) | ||
Ig strand C | 247..251 | CDD:409353 | 1/3 (33%) | ||
Ig strand E | 274..278 | CDD:409353 | 2/3 (67%) | ||
Ig strand F | 288..293 | CDD:409353 | 3/4 (75%) | ||
Ig strand G | 301..304 | CDD:409353 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |