Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001020812.1 | Gene: | Psg29 / 292666 | RGDID: | 1565741 | Length: | 468 | Species: | Rattus norvegicus |
Alignment Length: | 534 | Identity: | 112/534 - (20%) |
---|---|---|---|
Similarity: | 175/534 - (32%) | Gaps: | 170/534 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 335 LSVNSYVSVHILPQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTT-------GRD 392
Fly 393 NIRFLSKSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQNVRPGPLIS 457
Fly 458 LKCSASGSPPPQFAW-----LLDSQPIMD-----------VSLH-HRFA--IGQFVDMSG-DVIS 502
Fly 503 HLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPV 567
Fly 568 EQIRWEKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIV--RSRAGEEARRDMQLNV 630
Fly 631 NSPPVIEPFKFPKNLQEG-------GRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQI------- 681
Fly 682 ------TEKKEE--FYS--LLVFKDISARHSGKYTCYASNAAAKVNYTAE---LQVRVAPRWRYE 733
Fly 734 PM--------DTAIMLGNTISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLLLNLATDN 790
Fly 791 DEGYYMCQATNEIG 804 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | 1/1 (100%) | ||
Ig | 264..334 | CDD:143165 | |||
I-set | 345..433 | CDD:254352 | 20/94 (21%) | ||
Ig | 358..431 | CDD:143165 | 16/79 (20%) | ||
Ig | 456..533 | CDD:143165 | 22/96 (23%) | ||
IGc2 | 553..619 | CDD:197706 | 11/67 (16%) | ||
I-set | 634..724 | CDD:254352 | 24/116 (21%) | ||
ig | 645..712 | CDD:278476 | 16/90 (18%) | ||
IG_like | 734..815 | CDD:214653 | 17/79 (22%) | ||
Ig | 745..815 | CDD:299845 | 14/60 (23%) | ||
I-set | 820..913 | CDD:254352 | |||
Ig | 838..920 | CDD:299845 | |||
FN3 | 917..1033 | CDD:238020 | |||
FN3 | 1040..1142 | CDD:238020 | |||
fn3 | 1150..1237 | CDD:278470 | |||
FN3 | 1263..1345 | CDD:238020 | |||
Ig | 1350..1436 | CDD:299845 | |||
IG_like | 1358..1436 | CDD:214653 | |||
FN3 | 1441..1530 | CDD:238020 | |||
FN3 | 1542..1620 | CDD:238020 | |||
Psg29 | NP_001020812.1 | Ig_CEACAM_D1 | 36..136 | CDD:143251 | 23/113 (20%) |
Ig_CEACAM_D1 | 152..256 | CDD:143251 | 36/166 (22%) | ||
Ig | 272..376 | CDD:299845 | 23/108 (21%) | ||
IG_like | 389..462 | CDD:214653 | 16/69 (23%) | ||
IGc2 | 396..457 | CDD:197706 | 13/60 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |