DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and Cntn6

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:NP_037357.1 Gene:Cntn6 / 27256 RGDID:62008 Length:1028 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
Cntn6NP_037357.1 Ig strand D 76..80 CDD:409353
Ig strand E 82..88 CDD:409353
Ig strand F 95..104 CDD:409353
Ig strand G 107..120 CDD:409353
Ig 129..214 CDD:416386
Ig strand A 130..135 CDD:409353
Ig strand B 139..145 CDD:409353
Ig strand C 153..159 CDD:409353
Ig strand C' 164..166 CDD:409353
Ig strand D 171..176 CDD:409353
Ig strand E 179..183 CDD:409353
Ig strand F 193..201 CDD:409353
Ig strand G 203..214 CDD:409353
Ig 227..315 CDD:416386
Ig strand A 227..232 CDD:409353
Ig strand A' 235..240 CDD:409353
Ig strand B 243..252 CDD:409353
Ig strand C 258..262 CDD:409353
Ig strand C' 265..267 CDD:409353
Ig strand D 276..279 CDD:409353
Ig strand E 280..285 CDD:409353
Ig strand F 293..301 CDD:409353
Ig strand G 304..315 CDD:409353
Ig 319..403 CDD:416386
Ig strand A 319..322 CDD:409353
Ig strand A' 326..330 CDD:409353
Ig strand B 334..342 CDD:409353
Ig strand C 348..353 CDD:409353
Ig strand C' 355..358 CDD:409353
Ig strand D 363..367 CDD:409353
Ig strand E 369..374 CDD:409353
Ig strand F 383..390 CDD:409353
Ig strand G 394..403 CDD:409353
Ig5_Contactin 408..496 CDD:409358
Ig strand B 427..431 CDD:409358
Ig strand C 440..444 CDD:409358
Ig strand E 462..466 CDD:409358
Ig strand F 476..481 CDD:409358
Ig strand G 489..492 CDD:409358
Ig 500..598 CDD:416386
Ig strand A' 507..512 CDD:409353
Ig strand B 515..523 CDD:409353
Ig strand C 532..536 CDD:409353
Ig strand E 560..564 CDD:409353
Ig strand F 573..580 CDD:409353
Ig strand G 587..591 CDD:409353
FN3 598..691 CDD:238020
FN3 703..796 CDD:238020
FN3 805..898 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 887..908
FN3 903..983 CDD:214495
Ig 26..120 CDD:416386
Ig strand A 27..31 CDD:409353
Ig strand A' 34..39 CDD:409353
Ig strand B 45..53 CDD:409353
Ig strand C 58..64 CDD:409353
Ig strand C' 66..69 CDD:409353
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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