DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and LRIG1

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:NP_056356.2 Gene:LRIG1 / 26018 HGNCID:17360 Length:1093 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
LRIG1NP_056356.2 leucine-rich repeat 51..69 CDD:275380
LRR_RI <53..176 CDD:238064
leucine-rich repeat 70..93 CDD:275380
LRR_8 71..127 CDD:290566
leucine-rich repeat 117..140 CDD:275378
LRR_RI 131..416 CDD:238064
LRR_8 140..223 CDD:290566
leucine-rich repeat 141..164 CDD:275380
leucine-rich repeat 165..197 CDD:275380
LRR_8 211..271 CDD:290566
leucine-rich repeat 213..236 CDD:275380
leucine-rich repeat 237..260 CDD:275380
LRR_8 259..319 CDD:290566
leucine-rich repeat 261..284 CDD:275380
leucine-rich repeat 285..308 CDD:275380
LRR_8 308..367 CDD:290566
leucine-rich repeat 309..332 CDD:275380
leucine-rich repeat 333..356 CDD:275380
leucine-rich repeat 357..381 CDD:275380
LRR_8 383..442 CDD:290566
leucine-rich repeat 384..405 CDD:275380
leucine-rich repeat 408..431 CDD:275380
LRRCT 442..490 CDD:214507
I-set 495..595 CDD:254352
Ig 512..586 CDD:143165
I-set 599..689 CDD:254352
Ig_1 616..690 CDD:143240
I-set 693..780 CDD:254352
IGc2 707..770 CDD:197706
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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