Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_501339.2 | Gene: | rig-4 / 177597 | WormBaseID: | WBGene00004371 | Length: | 2325 | Species: | Caenorhabditis elegans |
Alignment Length: | 2471 | Identity: | 487/2471 - (19%) |
---|---|---|---|
Similarity: | 817/2471 - (33%) | Gaps: | 756/2471 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LEPPCLVLEKAL--------------LLGALLLAVLATP-LLATSGLRVPTFLLEPAPRLLFGND 53
Fly 54 TGAQVTCTAHGSPPPLVTWVLRDGSLATQVPGLRKISGNGTLHFPPFLAQYYRTDVHEATYRCRA 118
Fly 119 SNEAGTVLSRNVQVHAVVRRQFHVH-------VENT-------------EVYLGNSALIKCAIPE 163
Fly 164 YVRPYVRVASWHRGEEILLPDLSDVAGRYVVLAASGDLYVRSVRSEDGLMKFSCLVTNTLNGERQ 228
Fly 229 -----------------RSDAVMLQVKELSKNLAPRTTQKPVM-----EIHVERGNDVHLPCNIQ 271
Fly 272 GNPFPIFTWYRVSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFGEQRIEIRLS 336
Fly 337 VNSYVSVHILPQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNIRFLSKSS 401
Fly 402 LLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQNVRPG-PLISLKCSASGS 465
Fly 466 PPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQH 530
Fly 531 SARLNVYGPPYVRAIGPI--KAVAGEDIIVHCPFAGYPVEQ--IRWEKAHQELTTSNHYEL-ASV 590
Fly 591 ADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFK-------FPKNLQ-- 646
Fly 647 -----EGGRAQITCAV---SSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSG 703
Fly 704 KYTCYASNAAAKVNYTAELQV-------------------------RVAPR-------------- 729
Fly 730 -WRY--EPMDTAIMLGNTISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLLLNLATDND 791
Fly 792 EGYYMCQ--ATNEIGAGL-----------------KKTIRINV---------------------- 815
Fly 816 ---------NEPAR--------FEQSARNISSRRND--------PVTLDCHAKGDEP-------- 847
Fly 848 ---------------------ITIGWT---QNNG---RIDLNNFRFSIAEMKTEKGVDSQLT--- 882
Fly 883 ---IGHSDRHDSGVYRCIAENPYGRAEQIIFLA--VQERPDTPSHLEIFEVGSRTVKLSWRRPFD 942
Fly 943 GNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSISRSYDSDLRESAIVAGLTPA 1007
Fly 1008 TTFLIRMQAINEIERSAYTEAI----VLKTQEEAPTEAPSNVQVQTGGESELIVTWQIPPRESWN 1068
Fly 1069 GELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLRGLRKYSRYAVTIRAMNSFGSGP 1133
Fly 1134 WSAAIFGTTAEGVPEAAPQNVNCTALSSQSLKISWLEP--PLQFHGGIIQGYKILYRPIVHQI-- 1194
Fly 1195 DFPAKLEIKRTSNLETYLHTLHKASNYSIRVLAYTATGDGLA-SHPLFCQTDDDVPDAPAAIKAA 1258
Fly 1259 ALTADSILISWLTPKNRNGIISHYTVYSREAGRKGQAKTHMVR---VDEN--GYPVTFESRSLAE 1318
Fly 1319 NQMYEFWVSASTSVGEGEPTSVIAQATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRAR 1383
Fly 1384 W-------LTRD-----RPVTFSPFYEVTNEGN----------LKIHRVEGSLSGNYTCTANNLF 1426
Fly 1427 GSDEIQYQVIAMKP--------PSAP--QIIVQYAS---ADSIRVSWDAPDDG--GAPLQGYTIS 1476
Fly 1477 Y--HTAGESWSITELL-----PENNAFTISGLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGKA 1534
Fly 1535 SQAPNANELIA--TNATCVNLKLSSW-QNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEE---- 1592
Fly 1593 NRENLIFCDFLPAKWYQLRISATNDAG---------KTTEH-------YHFSTTNIDGITIPPPS 1641
Fly 1642 VFPSENDLMNNLINSTNPTSGDWFATLIVVVIITVSIITIALTIKHRRTLCGPIAEGYESRTLPG 1706
Fly 1707 DYKEDHENRRNQQVYSASPVKTVDKGNESEMYEISPYATFSVNGG------------RTGAPAKT 1759
Fly 1760 PTRAVAAQTPLDYTMQFKTFGHPE---GENLNATAYPL---LPSSGFGHVKSKSSWHKQRYYNTE 1818
Fly 1819 DESTLSKSMTIVAGS-QAGH------SKKSNGGRSAKSSAACSGVVAGSESDTSISPSTEFSNMP 1876
Fly 1877 TYRVPCKSSRSSDGRAVVD---MFRPDSSTESNND-----------------------------Q 1909
Fly 1910 GSPAPERRHNTPRHVLGMGMAMGLGGGGGGGVGGGNGPAEKRSAGQRSRKHGSAAQQPSNQTLER 1974
Fly 1975 RKCPGSSNSLDSEVDAETAASLAASIAAMAGSGAGADLSG----------GFRPPAGFHDGREPG 2029
Fly 2030 DHSDCEREQRALDLEVQRVMESTGDAQLAKMDR--------EELTSLLARYHEKKEQERLEYTIH 2086
Fly 2087 V 2087 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | 15/76 (20%) |
Ig | 56..125 | CDD:143165 | 15/68 (22%) | ||
I-set | 246..337 | CDD:254352 | 17/95 (18%) | ||
Ig | 264..334 | CDD:143165 | 13/69 (19%) | ||
I-set | 345..433 | CDD:254352 | 8/87 (9%) | ||
Ig | 358..431 | CDD:143165 | 8/72 (11%) | ||
Ig | 456..533 | CDD:143165 | 24/76 (32%) | ||
IGc2 | 553..619 | CDD:197706 | 17/68 (25%) | ||
I-set | 634..724 | CDD:254352 | 18/106 (17%) | ||
ig | 645..712 | CDD:278476 | 13/76 (17%) | ||
IG_like | 734..815 | CDD:214653 | 21/99 (21%) | ||
Ig | 745..815 | CDD:299845 | 18/88 (20%) | ||
I-set | 820..913 | CDD:254352 | 23/151 (15%) | ||
Ig | 838..920 | CDD:299845 | 22/124 (18%) | ||
FN3 | 917..1033 | CDD:238020 | 33/119 (28%) | ||
FN3 | 1040..1142 | CDD:238020 | 20/101 (20%) | ||
fn3 | 1150..1237 | CDD:278470 | 26/91 (29%) | ||
FN3 | 1263..1345 | CDD:238020 | 23/86 (27%) | ||
Ig | 1350..1436 | CDD:299845 | 25/107 (23%) | ||
IG_like | 1358..1436 | CDD:214653 | 22/99 (22%) | ||
FN3 | 1441..1530 | CDD:238020 | 25/102 (25%) | ||
FN3 | 1542..1620 | CDD:238020 | 18/93 (19%) | ||
rig-4 | NP_501339.2 | IG_like | 330..402 | CDD:214653 | 17/122 (14%) |
IGc2 | 338..393 | CDD:197706 | 13/65 (20%) | ||
I-set | 459..543 | CDD:254352 | 30/96 (31%) | ||
IGc2 | 478..534 | CDD:197706 | 22/68 (32%) | ||
IG_like | 553..639 | CDD:214653 | 22/86 (26%) | ||
Ig | 564..635 | CDD:143165 | 18/71 (25%) | ||
FN3 | 643..747 | CDD:238020 | 20/126 (16%) | ||
FN3 | 756..850 | CDD:238020 | 24/107 (22%) | ||
FN3 | 858..954 | CDD:238020 | 12/95 (13%) | ||
FN3 | 959..1042 | CDD:238020 | 13/83 (16%) | ||
FN3 | 1057..1151 | CDD:238020 | 32/116 (28%) | ||
FN3 | 1156..1251 | CDD:238020 | 21/106 (20%) | ||
FN3 | 1258..1356 | CDD:238020 | 28/99 (28%) | ||
FN3 | 1361..1453 | CDD:238020 | 25/99 (25%) | ||
FN3 | 1464..1560 | CDD:238020 | 23/110 (21%) | ||
FN3 | 1572..1664 | CDD:238020 | 20/91 (22%) | ||
FN3 | 1679..1764 | CDD:238020 | 18/89 (20%) | ||
FN3 | 1774..1858 | CDD:238020 | 12/132 (9%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |