DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and zig-8

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:NP_499714.1 Gene:zig-8 / 176732 WormBaseID:WBGene00006985 Length:268 Species:Caenorhabditis elegans


Alignment Length:229 Identity:54/229 - (23%)
Similarity:99/229 - (43%) Gaps:30/229 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 YASNAAAKVNYTAELQVRVAPRWRYE-PMDTA--IMLGNTISINCEAEGYPIPTITWFK-GQG-- 766
            ||:...|.....|.|:   ..|.|.| |..|.  ::..|...::|.........|.|.: ..|  
 Worm    16 YATGHGASEEVMACLR---QERSRVENPSQTIVNVVAENPAYLHCSVPPDAEHEIAWTRVSDGAL 77

  Fly   767 --KGSKDFK-----PLSMRNHSL-LLNL--ATDNDEGYYMCQAT---NEIGAGLKKTIRINVNEP 818
              .|::.|.     .:|.::.:: :|||  |...|.|.|:|:..   |.:.|...|.:...:..|
 Worm    78 LTAGNRTFTRDPRWQVSKKSANIWVLNLRRAEQQDSGCYLCEINDKHNTVYAVYLKVLEPPLPSP 142

  Fly   819 ARFE-QSARNISSRRNDPVTLDCHA----KGDEPITIGWTQNNGRIDLNNFRFSIAEMKTEKGVD 878
            :..: :|.:.:::...|.|.|:|..    |.:|.:.:.||::...|:.|:....|.::|.:.||.
 Worm   143 SSLQKKSTKLMANMSGDEVVLNCTVTSTDKDEEVLDVVWTRDGNTINFNDTEKYILKVKRDAGVV 207

  Fly   879 SQ-LTIGHSDRHDSGVYRCIAENPYGRAEQIIFL 911
            .: :.|..:...|.|.|.|  |:...:|.||:.:
 Worm   208 IETMRIRKATMEDDGNYAC--EHSQQKASQIVHI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352 5/15 (33%)
ig 645..712 CDD:278476 2/3 (67%)
IG_like 734..815 CDD:214653 21/98 (21%)
Ig 745..815 CDD:299845 18/85 (21%)
I-set 820..913 CDD:254352 24/98 (24%)
Ig 838..920 CDD:299845 21/79 (27%)
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
zig-8NP_499714.1 IG_like 55..134 CDD:214653 17/78 (22%)
Ig 55..129 CDD:143165 16/73 (22%)
ig 158..229 CDD:278476 20/72 (28%)
IG_like 158..227 CDD:214653 19/70 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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