Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001022014.1 | Gene: | rig-6 / 173828 | WormBaseID: | WBGene00016354 | Length: | 1196 | Species: | Caenorhabditis elegans |
Alignment Length: | 1300 | Identity: | 265/1300 - (20%) |
---|---|---|---|
Similarity: | 429/1300 - (33%) | Gaps: | 430/1300 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 175 HRGEE-------ILLPDLSDVAGRYVVLAAS------GDLYVRSVRSEDGLMK-----------F 215
Fly 216 SCLVTNTLNGERQRSDAVMLQVKELSKNLAPRTTQKPVMEIHVERGND---VHLPCNIQGNPFPI 277
Fly 278 FTWYRVSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQASNQFGEQRIEIRLSVNSYVS 342
Fly 343 VHILPQVQIVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNI------RFLS-KS 400
Fly 401 SLLVQNVGRRDRGVYQC-----------------LVENQRASAQAMAELKLGDTVPELIYTFIEQ 448
Fly 449 NVRPGPLISLKCSASGSPPPQFAW-LLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPD 512
Fly 513 DGGLYKCVASNSMGSVQHSARLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQ 577
Fly 578 ELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKFP 642
Fly 643 KNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEF---YSLLVFKDISARHSGK 704
Fly 705 YTCYASNAAAKVNYTAELQVR-VAPRWRYEPMDTAIM--LGNTISINCEAEGYPIPTITWFKGQG 766
Fly 767 K-----GSKDFKPLSMRNHSLLLNL--ATDNDEGYYMCQATNEIGAGLKKTIRINVNEPA----R 820
Fly 821 FEQSARNISSRRNDPVTLDCHAKGDEPITI-GWTQNNGRI-DLNNFRFSIAEMKTEKGVDSQLTI 883
Fly 884 GHSDRH-----DSGVYRCIA----------ENPYGRAEQIIFLAVQERPDTPSHL-----EIFEV 928
Fly 929 G--SRTVKLSWRRP------FDGNSPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPST 985
Fly 986 SISRSYDSDL-----RESAIVAGLTPATTFLIRMQAINEIERSAYTEAIV----LKTQEEAPTEA 1041
Fly 1042 PSNVQVQTGGESELIVTWQ------------IPPRESWNGELIG--------------------- 1073
Fly 1074 -------YTVNCSE----------------------------------EKQNINFISVVNSS--- 1094
Fly 1095 ----------------------------LKSTIVSG---WATTKATLRGLRKYSRYAVTIRAMNS 1128
Fly 1129 FGS-GPWSAAIFGTTAEGVPEAAP----------QNVNCTALSSQSLKISWLEPPLQFHGGIIQG 1182
Fly 1183 YKI-LY----RPIVHQIDFPAKLEIKRTS---NLETYLHTLHKASNYSIRVLAYTATGDGLASHP 1239 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
Ig | 56..125 | CDD:143165 | |||
I-set | 246..337 | CDD:254352 | 29/93 (31%) | ||
Ig | 264..334 | CDD:143165 | 24/69 (35%) | ||
I-set | 345..433 | CDD:254352 | 16/111 (14%) | ||
Ig | 358..431 | CDD:143165 | 16/96 (17%) | ||
Ig | 456..533 | CDD:143165 | 28/77 (36%) | ||
IGc2 | 553..619 | CDD:197706 | 3/65 (5%) | ||
I-set | 634..724 | CDD:254352 | 21/92 (23%) | ||
ig | 645..712 | CDD:278476 | 18/69 (26%) | ||
IG_like | 734..815 | CDD:214653 | 21/89 (24%) | ||
Ig | 745..815 | CDD:299845 | 18/76 (24%) | ||
I-set | 820..913 | CDD:254352 | 19/109 (17%) | ||
Ig | 838..920 | CDD:299845 | 17/98 (17%) | ||
FN3 | 917..1033 | CDD:238020 | 27/137 (20%) | ||
FN3 | 1040..1142 | CDD:238020 | 28/210 (13%) | ||
fn3 | 1150..1237 | CDD:278470 | 25/104 (24%) | ||
FN3 | 1263..1345 | CDD:238020 | |||
Ig | 1350..1436 | CDD:299845 | |||
IG_like | 1358..1436 | CDD:214653 | |||
FN3 | 1441..1530 | CDD:238020 | |||
FN3 | 1542..1620 | CDD:238020 | |||
rig-6 | NP_001022014.1 | Ig | 153..237 | CDD:299845 | 28/84 (33%) |
Ig | 240..335 | CDD:299845 | 15/102 (15%) | ||
Ig | 358..427 | CDD:299845 | 27/80 (34%) | ||
IG_like | 363..436 | CDD:214653 | 29/84 (35%) | ||
I-set | 441..534 | CDD:254352 | 27/186 (15%) | ||
IGc2 | 456..524 | CDD:197706 | 21/98 (21%) | ||
I-set | 547..627 | CDD:254352 | 19/86 (22%) | ||
Ig | 552..627 | CDD:299845 | 19/81 (23%) | ||
FN3 | 737..839 | CDD:238020 | 24/130 (18%) | ||
fn3 | 970..1047 | CDD:278470 | 14/81 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |