| Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001251131.1 | Gene: | rig-5 / 172791 | WormBaseID: | WBGene00004372 | Length: | 482 | Species: | Caenorhabditis elegans |
| Alignment Length: | 449 | Identity: | 101/449 - (22%) |
|---|---|---|---|
| Similarity: | 164/449 - (36%) | Gaps: | 86/449 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 289 LYPIPSSQRV----ILSRTLLLIKNADERDAGKWICQASNQFGEQRIEIRLSVNSYVSVHILPQV 349
Fly 350 QIVNSGGTANFNCTTTGSAIDAIDWLHNGKP---LQANNALTTGRDNIRFLSKSS-------LLV 404
Fly 405 QNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELI--YTFIEQNVRPGPLISLKCSASGSPP 467
Fly 468 PQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQH-S 531
Fly 532 ARLNVYGPPYVRAIG-PIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGGQ 595
Fly 596 -----LVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLN-------VNSPPVIEPFKFPKNLQEG 648
Fly 649 GRA---QITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGK 704 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | |
| Ig | 56..125 | CDD:143165 | |||
| I-set | 246..337 | CDD:254352 | 12/51 (24%) | ||
| Ig | 264..334 | CDD:143165 | 12/48 (25%) | ||
| I-set | 345..433 | CDD:254352 | 16/97 (16%) | ||
| Ig | 358..431 | CDD:143165 | 14/82 (17%) | ||
| Ig | 456..533 | CDD:143165 | 20/77 (26%) | ||
| IGc2 | 553..619 | CDD:197706 | 16/70 (23%) | ||
| I-set | 634..724 | CDD:254352 | 15/74 (20%) | ||
| ig | 645..712 | CDD:278476 | 13/63 (21%) | ||
| IG_like | 734..815 | CDD:214653 | |||
| Ig | 745..815 | CDD:299845 | |||
| I-set | 820..913 | CDD:254352 | |||
| Ig | 838..920 | CDD:299845 | |||
| FN3 | 917..1033 | CDD:238020 | |||
| FN3 | 1040..1142 | CDD:238020 | |||
| fn3 | 1150..1237 | CDD:278470 | |||
| FN3 | 1263..1345 | CDD:238020 | |||
| Ig | 1350..1436 | CDD:299845 | |||
| IG_like | 1358..1436 | CDD:214653 | |||
| FN3 | 1441..1530 | CDD:238020 | |||
| FN3 | 1542..1620 | CDD:238020 | |||
| rig-5 | NP_001251131.1 | IG_like | 92..189 | CDD:214653 | 19/109 (17%) |
| Ig_3 | 191..270 | CDD:372822 | 22/84 (26%) | ||
| IG | 294..380 | CDD:214652 | 18/87 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.910 | |||||