Sequence 1: | NP_996226.2 | Gene: | Dscam3 / 42103 | FlyBaseID: | FBgn0261046 | Length: | 2087 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038943864.1 | Gene: | Dscam / 171119 | RGDID: | 619992 | Length: | 2034 | Species: | Rattus norvegicus |
Alignment Length: | 2076 | Identity: | 637/2076 - (30%) |
---|---|---|---|
Similarity: | 972/2076 - (46%) | Gaps: | 225/2076 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LLFGNDTGAQVTCTAHGSPPPLVTWVLRDGSLATQVPGLRKISGNGTLHFPPFLAQYYRTDVHEA 112
Fly 113 TYRCRASNEAGTVLSRNVQVHAVVRRQFHVHVENTEVYLGNSALIKCAIPEYVRPYVRVASWHRG 177
Fly 178 EEILLPDLSDVAGRYVVLAASGDLYVRSVRSEDGLMKFSCLVTNTLNGERQRSDAVMLQVKELSK 242
Fly 243 NLAPRTTQKPVMEIHVER----GNDVHLPCNIQGNPFPIFTWYRVSDSAALYPIPSSQRVILSRT 303
Fly 304 LLLIKNADERDAGKWICQASNQFGEQRIEIRLSVNSYVSVHILPQVQIVNSGGTANFNCTTTGSA 368
Fly 369 IDAIDWLHNGKPLQ-ANNALTTGRDNIRFLSKSSLLVQNVGRRDRGVYQCLVENQRASAQAMAEL 432
Fly 433 KLGDTVPELIYTFIEQNVRPGPLISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMS 497
Fly 498 GDVISHLNISHVRPDDGGLYKCVASNSMGSVQHSARLNVYGPPYVRAIGPIKAVAGEDIIVHCPF 562
Fly 563 AGYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQ 627
Fly 628 LNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLL 692
Fly 693 VFKDISARHSGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIP 757
Fly 758 TITWFKGQGKGSKDFKPLSMR-------NHSLLLNLATDNDEGYYMCQATNEIGAGLKKTIRINV 815
Fly 816 NEPARFEQSARNISSRRNDPVTLDCHAKGDEPITIGWTQNNGRIDLNNFRFSIAEMKTEKGVDSQ 880
Fly 881 LTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAVQERPDTPSHLEIFEVGSRTVKLSWRRPFDGNS 945
Fly 946 PVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSISRSYD-SDLRESAIVAGLTPATT 1009
Fly 1010 FLIRMQAINEIERSAYTEAIVLKTQEEAPTEAPSNVQVQTGGESELIVTWQIPPRESWNGELIGY 1074
Fly 1075 TVNCSEEKQNINF---ISVVNSSLKSTIVSGWATTKATLRGLRKYSRYAVTIRAMNSFGSGPWSA 1136
Fly 1137 AIFGTTAEGVPEAAPQNVNCTALSSQSLKISWLEPPLQFHGGIIQGYKILYRPIVHQIDFPAKL- 1200
Fly 1201 EIKRTSNLETYLHT--LHKASNYSIRVLAYTATGDGLASHPLFCQTDDDVPDAPAAIKAAALTAD 1263
Fly 1264 SILISWLTPKNRNGIISHYTVYSREAGRKGQAKTH---MVRVDENGYPVTFESR--SLAENQMYE 1323
Fly 1324 FWVSASTSVGEGEPTSVIAQATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRARWL--T 1386
Fly 1387 RDRP--VTFSPFYEVTNEGNLKIHRVEGSLSGNYTCTANNLFGSDEIQYQVIAMKPPSAPQIIVQ 1449
Fly 1450 YASADSIRVSWDAPDDGGAPLQGYTISY-HTAGESWSITELLPENNAFTISGLKCGNQYIIKMSA 1513
Fly 1514 HNMVGSGVASEEINVWTKGKASQAPNANELIAT-NATCVNLKLSSWQNGGCSIHHFSIEHRPLGD 1577
Fly 1578 IRWTVV-TSDISNAEENRENLIFCDFLPAKWYQLRISATNDAGKTTEHYHFSTTNIDGITIPP-- 1639
Fly 1640 PSVFPSENDLMNNLINSTNPTSGDWFATLIVVVIITVSII---TIALTIKHRRTL--------CG 1693
Fly 1694 PIAE---GYESRTLPGDYKEDHENRRNQQVYSA-------SPVKTVDK-----------GNESEM 1737
Fly 1738 ----------YEISPYAT---FSVNGGRTGAPAKTPTRAVAAQTPLD-YTMQFKTFGHPE---GE 1785
Fly 1786 NLNATAYPLLPSSGFGHVKSKSSWHKQRYYNTEDE------STLSKSMTIVAGSQA-GHSKKSNG 1843
Fly 1844 GRSAK--------SSAACSGVVAGSESDTSISPSTEFSNMPTYRVPCKSSRSSDGRAVVDMFRPD 1900
Fly 1901 SSTESNNDQGSPAPERRHNTPRHVLG----------MGMAMGLGG-GGGGGVGGGNG-------- 1946
Fly 1947 -----------PAEKRSA------GQRSRKHGSAAQQPSNQTLERRKCPGSSNSLDSEVDA 1990 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dscam3 | NP_996226.2 | IG | 56..133 | CDD:214652 | 29/76 (38%) |
Ig | 56..125 | CDD:143165 | 27/68 (40%) | ||
I-set | 246..337 | CDD:254352 | 27/94 (29%) | ||
Ig | 264..334 | CDD:143165 | 22/69 (32%) | ||
I-set | 345..433 | CDD:254352 | 24/88 (27%) | ||
Ig | 358..431 | CDD:143165 | 21/73 (29%) | ||
Ig | 456..533 | CDD:143165 | 32/76 (42%) | ||
IGc2 | 553..619 | CDD:197706 | 23/65 (35%) | ||
I-set | 634..724 | CDD:254352 | 39/89 (44%) | ||
ig | 645..712 | CDD:278476 | 28/66 (42%) | ||
IG_like | 734..815 | CDD:214653 | 31/87 (36%) | ||
Ig | 745..815 | CDD:299845 | 28/76 (37%) | ||
I-set | 820..913 | CDD:254352 | 24/92 (26%) | ||
Ig | 838..920 | CDD:299845 | 29/81 (36%) | ||
FN3 | 917..1033 | CDD:238020 | 35/116 (30%) | ||
FN3 | 1040..1142 | CDD:238020 | 27/104 (26%) | ||
fn3 | 1150..1237 | CDD:278470 | 34/89 (38%) | ||
FN3 | 1263..1345 | CDD:238020 | 27/86 (31%) | ||
Ig | 1350..1436 | CDD:299845 | 33/89 (37%) | ||
IG_like | 1358..1436 | CDD:214653 | 28/81 (35%) | ||
FN3 | 1441..1530 | CDD:238020 | 29/89 (33%) | ||
FN3 | 1542..1620 | CDD:238020 | 29/79 (37%) | ||
Dscam | XP_038943864.1 | Ig | 26..121 | CDD:416386 | 31/86 (36%) |
Ig strand A' | 33..37 | CDD:409353 | 0/2 (0%) | ||
Ig strand B | 40..49 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 55..61 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 63..66 | CDD:409353 | 1/2 (50%) | ||
Ig strand D | 72..75 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 80..85 | CDD:409353 | 2/4 (50%) | ||
Ig strand F | 98..106 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 109..121 | CDD:409353 | 3/11 (27%) | ||
Ig | 125..210 | CDD:416386 | 30/90 (33%) | ||
Ig strand A | 126..130 | CDD:409353 | 1/3 (33%) | ||
Ig strand A' | 132..136 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 139..149 | CDD:409353 | 5/9 (56%) | ||
Ig strand C | 157..163 | CDD:409353 | 3/11 (27%) | ||
Ig strand C' | 164..167 | CDD:409353 | 0/2 (0%) | ||
Ig strand E | 179..185 | CDD:409353 | 3/5 (60%) | ||
Ig strand F | 191..201 | CDD:409353 | 3/9 (33%) | ||
IGc2 | 239..300 | CDD:197706 | 22/65 (34%) | ||
Ig strand B | 242..246 | CDD:409353 | 2/3 (67%) | ||
Ig strand C | 255..259 | CDD:409353 | 0/3 (0%) | ||
Ig strand F | 290..295 | CDD:409353 | 1/4 (25%) | ||
Ig | 313..395 | CDD:416386 | 22/87 (25%) | ||
Ig strand A | 314..319 | CDD:409353 | 0/4 (0%) | ||
Ig strand A' | 322..326 | CDD:409353 | 0/3 (0%) | ||
Ig strand B | 329..339 | CDD:409353 | 1/9 (11%) | ||
Ig strand C | 344..350 | CDD:409353 | 1/5 (20%) | ||
Ig strand C' | 351..354 | CDD:409353 | 1/2 (50%) | ||
Ig strand E | 368..374 | CDD:409353 | 1/5 (20%) | ||
Ig strand F | 381..389 | CDD:409353 | 5/7 (71%) | ||
Ig | 406..501 | CDD:416386 | 40/97 (41%) | ||
Ig strand A | 406..409 | CDD:409353 | 1/2 (50%) | ||
Ig strand A' | 415..419 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 422..431 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 436..442 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 444..447 | CDD:409353 | 0/2 (0%) | ||
Ig strand D | 452..460 | CDD:409353 | 3/10 (30%) | ||
Ig strand E | 464..473 | CDD:409353 | 5/8 (63%) | ||
Ig strand F | 480..488 | CDD:409353 | 4/7 (57%) | ||
Ig strand G | 491..501 | CDD:409353 | 4/9 (44%) | ||
Ig | 504..593 | CDD:416386 | 28/90 (31%) | ||
Ig strand A | 505..507 | CDD:409353 | 0/1 (0%) | ||
Ig strand A' | 512..516 | CDD:409353 | 1/3 (33%) | ||
Ig strand B | 519..526 | CDD:409353 | 2/6 (33%) | ||
Ig strand C | 533..539 | CDD:409353 | 2/5 (40%) | ||
Ig strand C' | 540..542 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 549..553 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 557..563 | CDD:409353 | 2/5 (40%) | ||
Ig strand F | 571..579 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 583..593 | CDD:409353 | 0/9 (0%) | ||
Ig | 596..686 | CDD:416386 | 40/90 (44%) | ||
Ig strand A | 597..599 | CDD:409353 | 1/1 (100%) | ||
Ig strand B | 611..620 | CDD:409353 | 3/8 (38%) | ||
Ig strand C | 625..632 | CDD:409353 | 3/6 (50%) | ||
Ig strand C' | 634..636 | CDD:409353 | 0/1 (0%) | ||
Ig strand D | 643..648 | CDD:409353 | 1/4 (25%) | ||
Ig strand E | 651..658 | CDD:409353 | 2/6 (33%) | ||
Ig strand F | 665..673 | CDD:409353 | 5/7 (71%) | ||
Ig strand G | 676..685 | CDD:409353 | 2/8 (25%) | ||
Ig_DSCAM | 689..784 | CDD:409397 | 32/94 (34%) | ||
Ig strand B | 707..711 | CDD:409397 | 0/3 (0%) | ||
Ig strand C | 720..724 | CDD:409397 | 2/3 (67%) | ||
Ig strand E | 749..753 | CDD:409397 | 2/3 (67%) | ||
Ig strand F | 763..768 | CDD:409397 | 3/4 (75%) | ||
Ig strand G | 777..780 | CDD:409397 | 1/2 (50%) | ||
Ig_DSCAM | 785..884 | CDD:409398 | 27/98 (28%) | ||
Ig strand B | 805..809 | CDD:409398 | 0/3 (0%) | ||
Ig strand C | 818..822 | CDD:409398 | 0/3 (0%) | ||
Ig strand E | 848..852 | CDD:409398 | 2/3 (67%) | ||
Ig strand F | 862..867 | CDD:409398 | 1/4 (25%) | ||
Ig strand G | 875..878 | CDD:409398 | 0/2 (0%) | ||
FN3 | 885..978 | CDD:238020 | 35/116 (30%) | ||
FN3 | 986..1083 | CDD:238020 | 27/104 (26%) | ||
FN3 | 1091..1184 | CDD:238020 | 36/96 (38%) | ||
FN3 | 1189..1278 | CDD:238020 | 35/98 (36%) | ||
Ig_3 | 1287..1363 | CDD:404760 | 24/75 (32%) | ||
Ig strand B | 1303..1307 | CDD:409353 | 2/3 (67%) | ||
Ig strand C | 1316..1320 | CDD:409353 | 0/3 (0%) | ||
Ig strand E | 1342..1346 | CDD:409353 | 1/3 (33%) | ||
Ig strand F | 1356..1361 | CDD:409353 | 2/4 (50%) | ||
FN3 | 1380..1470 | CDD:238020 | 29/89 (33%) | ||
FN3 | 1486..1555 | CDD:238020 | 25/74 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4784 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3510 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG47134 | |
OrthoDB | 1 | 1.010 | - | - | D10185at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9015 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101656 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.690 |