DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP001304

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_321843.5 Gene:AgaP_AGAP001304 / 1281873 VectorBaseID:AGAP001304 Length:482 Species:Anopheles gambiae


Alignment Length:507 Identity:98/507 - (19%)
Similarity:157/507 - (30%) Gaps:215/507 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   462 ASGSP---------PPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLY 517
            ::|||         .|.||     .||.:|::    .||:...:|                    
Mosquito     9 SAGSPETRGNEQELKPSFA-----SPIENVTV----PIGREATLS-------------------- 44

  Fly   518 KCVASNSMGSVQHSARLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQE---- 578
             |:..|          |..|     :..||.:            :|.:.|.|:.|.:|..:    
Mosquito    45 -CIVQN----------LGAY-----KTTGPFR------------YAVFFVRQVGWMRASDQTVLA 81

  Fly   579 -----LTTSNHYELA-SVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIE 637
                 :|.::.|.:. ...|..:|.|:||... |:|.|.|              |:||..     
Mosquito    82 LQGRVVTHNSRYSVTQEERDVWRLKIRNVRES-DRGCYMC--------------QINVTP----- 126

  Fly   638 PFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHS 702
                   ||:    |:.|.               |..:|..:...:..         .|::.|..
Mosquito   127 -------LQK----QVGCV---------------DVQLPPDISDEQSS---------SDLTVREG 156

  Fly   703 GKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQGK 767
            |..|.|                                        |.|.|:|.|.:||.:..| 
Mosquito   157 GNATFY----------------------------------------CRATGHPAPKVTWRRDDG- 180

  Fly   768 GSKDFKPL-SMRNHS----------LLLNL--ATDNDEGYYMCQATNEIGAGLKKTIRINVNEPA 819
                 .|| .:||.:          :.|||  .:....|.|:|.|:||:...:.|.:.:||:.|.
Mosquito   181 -----NPLYLLRNGTDTRKVDQHVGIFLNLTHVSRKQMGAYLCIASNEVPPAVSKRVYLNVHFPP 240

  Fly   820 RFEQSARNISSRRNDPVTLDCHAKGDEPITIGWT------QNNG-----------------RIDL 861
            ....|...:.:.....|.|:|..:........||      :|.|                 .:.|
Mosquito   241 NVTTSKTLLGAYEESDVELECEVESFPRSVNYWTKVAKGGRNTGSSLGSTSSAESYNHHHQEVML 305

  Fly   862 NNFRFSIAEMKTEKGVDSQLT--IGHSDRHDSGVYRCIAENPYGRAEQIIFL 911
            |..|:.|.|........:::|  |......|:|.|.||:.|.:|:|.:.|.|
Mosquito   306 NGDRYEIREQHFGSLYAAKMTLRIRSFSVADAGSYMCISSNAFGKANRTIRL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165 14/79 (18%)
IGc2 553..619 CDD:197706 16/75 (21%)
I-set 634..724 CDD:254352 11/89 (12%)
ig 645..712 CDD:278476 11/66 (17%)
IG_like 734..815 CDD:214653 22/93 (24%)
Ig 745..815 CDD:299845 22/82 (27%)
I-set 820..913 CDD:254352 25/117 (21%)
Ig 838..920 CDD:299845 23/99 (23%)
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP001304XP_321843.5 IG_like 31..121 CDD:214653 26/156 (17%)
Ig 38..137 CDD:299845 32/192 (17%)
Ig 139..236 CDD:299845 28/151 (19%)
IG_like 148..236 CDD:214653 27/142 (19%)
IG_like 239..358 CDD:214653 26/119 (22%)
Ig 256..354 CDD:299845 22/97 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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