DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP000863

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_555858.3 Gene:AgaP_AGAP000863 / 1277377 VectorBaseID:AGAP000863 Length:330 Species:Anopheles gambiae


Alignment Length:301 Identity:76/301 - (25%)
Similarity:130/301 - (43%) Gaps:30/301 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   637 EP-FKFP---KNLQEGGRAQITCAVSS-GDMPIYFSWKKDDSSI-----------PSSLQITEKK 685
            || |.:|   ..:.:|..|..||.|:: |...:  :|.|.|:..           ...|.:|...
Mosquito    20 EPDFVYPLENVTVAKGRDATFTCVVNNLGGYRV--AWIKADAKAILAIHEHVITNNGRLSVTHND 82

  Fly   686 EEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIML--GNTISIN 748
            ...:: ||.:::.....|.|.|..:....|:. ||.|:|.:.|...||.....:|:  |.:..:.
Mosquito    83 YNTWT-LVIRNVKMEDRGVYMCQVNTDPMKMQ-TAFLEVVIPPDIIYEETSGDMMVPEGGSAKLI 145

  Fly   749 CEAEGYPIPTITWFKGQGK------GSK-DFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAG 806
            |:|.|||.|.|.|.:..|:      |:. ..|...:....|.|...|.::.|.|||.|:|.:...
Mosquito   146 CKARGYPKPKIVWRREDGREIIARNGTHGKMKATIVEGEMLSLTKVTRSEMGAYMCIASNGVPPS 210

  Fly   807 LKKTIRINVNEPARFEQSARNISSRRNDPVTLDCHAKGDEPITIGWTQNNGRIDLNNFRFSIAEM 871
            :.|.:::.|:.....:...:.:.:.....|||.|:.:........|.:.||.:.::|.|:.:.|.
Mosquito   211 VSKRLKLQVHFHPLIQVPNQLVGAPLGTDVTLICNVEASPKAINYWQRENGEMIISNERYLMNEN 275

  Fly   872 KTEK-GVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFL 911
            ::.. .|...|.|....:.|.|.|:||::|..|.||..|.|
Mosquito   276 ESSMYAVQMTLVIRKLHKSDMGGYKCISKNSIGDAEGTIRL 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352 24/102 (24%)
ig 645..712 CDD:278476 16/78 (21%)
IG_like 734..815 CDD:214653 23/89 (26%)
Ig 745..815 CDD:299845 21/76 (28%)
I-set 820..913 CDD:254352 24/93 (26%)
Ig 838..920 CDD:299845 22/75 (29%)
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP000863XP_555858.3 IG_like 28..119 CDD:214653 20/94 (21%)
V-set 30..110 CDD:284989 16/82 (20%)
IG_like 131..219 CDD:214653 23/87 (26%)
Ig 133..219 CDD:299845 23/85 (27%)
Ig 223..316 CDD:299845 23/92 (25%)
IG_like 234..317 CDD:214653 24/83 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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