DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP008776

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_314903.3 Gene:AgaP_AGAP008776 / 1275636 VectorBaseID:AGAP008776 Length:396 Species:Anopheles gambiae


Alignment Length:459 Identity:94/459 - (20%)
Similarity:159/459 - (34%) Gaps:133/459 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   471 AWL-LDSQPIMD-----VSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMGSVQ 529
            ||| :|:|.|:.     ::...|.||..    :...|..|.|..:|..|.|.|.|          
Mosquito    47 AWLRVDTQTILTIETLVITKSERIAITH----TEQRIWQLRIKDIRESDKGWYMC---------- 97

  Fly   530 HSARLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPVEQIRWEKAHQELTTSNHYELASVADGG 594
               ::|.         .|:|:..|.            ::..|..:|.....|:.:.:.||.....
Mosquito    98 ---QINT---------DPMKSQMG
Y------------LDVCRNSRATSWRHTTTNAQSASCTTAR 138

  Fly   595 QLV-IKNVEPGRDQGIY-TCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAV 657
            |.| |..:...:|..:. ||:|....|                     |||.|.   :..:|.| 
Mosquito   139 QCVEIPFLALSQDSVLKDTCLVPRTRG---------------------FPKKLP---KLSLTPA- 178

  Fly   658 SSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLV-------FKDISARHSGKYTCYASNAAAK 715
                               ..:::|:.:...::.:.       |.|....||.|           
Mosquito   179 -------------------QGVKVTKLRANTFTFIATDGSEGWFSDGWKSHSNK----------- 213

  Fly   716 VNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNH 780
                              ..|..::.|..:::.|.|.|.|.||:.|.:...|.....:...:.:|
Mosquito   214 ------------------TQDMVVLEGANVTLTCAATGVPEPTVNWKREGDKSITSVEDSGITSH 260

  Fly   781 -SLLLNL--ATDNDEGYYMCQATNEIGAGLKKTIRINVNEPARFEQSARNISSRRNDPVTLDCHA 842
             ..:|::  ...::.|.|.|.|:|.:...:.|.|.:.||.........|...:.....|||:||:
Mosquito   261 DGAMLHIYHIQRHNAGSYHCIASNGVPPTVSKRIIVTVNFQPIVRLPTRQYYAELGGRVTLECHS 325

  Fly   843 KGDEPITIG-WTQNNGRIDLNNFRF-SIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRA 905
            :. :|.:|. |.:..|.|.|....: |..|....| |..::||......|.|||:|:|:|..|..
Mosquito   326 EA-QPNSINYWMKGKGEIILQGGTYDSTLEDHVFK-VTMRITIRLEKASDYGVYKCVAKNSLGTT 388

  Fly   906 EQII 909
            |:.:
Mosquito   389 EESV 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165 17/67 (25%)
IGc2 553..619 CDD:197706 13/67 (19%)
I-set 634..724 CDD:254352 12/96 (13%)
ig 645..712 CDD:278476 9/73 (12%)
IG_like 734..815 CDD:214653 19/83 (23%)
Ig 745..815 CDD:299845 17/72 (24%)
I-set 820..913 CDD:254352 27/92 (29%)
Ig 838..920 CDD:299845 24/74 (32%)
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP008776XP_314903.3 Ig 10..106 CDD:299845 19/84 (23%)
IG_like 11..109 CDD:214653 20/87 (23%)
I-set 213..298 CDD:254352 20/113 (18%)
IGc2 221..286 CDD:197706 16/64 (25%)
IG_like 309..395 CDD:214653 27/86 (31%)
Ig 319..393 CDD:143165 26/76 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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