DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP005068

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_313942.4 Gene:AgaP_AGAP005068 / 1274750 VectorBaseID:AGAP005068 Length:305 Species:Anopheles gambiae


Alignment Length:314 Identity:62/314 - (19%)
Similarity:99/314 - (31%) Gaps:101/314 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   719 TAELQVRVAPRWRYE-PMDTAIMLGNTISINCEAEGYPIPTITWFK---------GQGKGSKD-- 771
            |.|....:.|.:.:: |.:..:.:|.|..::|..|......:.|.:         |....:.|  
Mosquito     4 TTEESEALQPYFDFDVPRNLTVTVGQTGFLHCRVERLGDQDVAWIRQRDLHILTMGASTYTSDQR 68

  Fly   772 ---FKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAGLKKTIRINVNEPARFEQSAR-----NI 828
               .:|....|.:|.:......|.|.|.||...|....|...:.:       .|..||     :|
Mosquito    69 FQVIRPEGSVNWTLQIKYPQTRDSGVYECQINTEPKMSLSYVLNV-------IELRARILGPSDI 126

  Fly   829 SSRRNDPVTLDC------HAKGDEPITIGW---------TQNN-------GRIDLNNFRFSIAEM 871
            ..:....:|:.|      |..|    |:.|         .|.|       |||.:        |.
Mosquito   127 FIKSGSEITMVCVIQQGPHELG----TVFWYKGRYCQPLAQENDIHSGDRGRITI--------ET 179

  Fly   872 KTEKGVDSQLTIGHSDRHDSGVYRCI---------------AENPYGRAEQIIFLAVQERPDTPS 921
            .....:.|:|.|..:.:.|:|.|.|:               .|:|          |..:....||
Mosquito   180 DWTDALTSRLKIKRAIQGDTGNYTCVPTMARSASVYAHVISGEHP----------AAMQHNAAPS 234

  Fly   922 HLEIFEVGSRTVKLSWRRPFDGNSPVLSYLVQYQALKYLQSHGSLA-AAGGDWN 974
                 .||.||::         .|..:..|:....|.||.|....: .:||..|
Mosquito   235 -----TVGHRTLR---------RSMCILLLLHLATLLYLLSDRCCSRRSGGQRN 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352 2/4 (50%)
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653 18/94 (19%)
Ig 745..815 CDD:299845 15/83 (18%)
I-set 820..913 CDD:254352 25/134 (19%)
Ig 838..920 CDD:299845 21/118 (18%)
FN3 917..1033 CDD:238020 15/59 (25%)
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP005068XP_313942.4 IG_like 20..113 CDD:214653 18/92 (20%)
Ig 23..99 CDD:299845 14/75 (19%)
Ig 134..205 CDD:143165 18/82 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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