DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP004108

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_312987.5 Gene:AgaP_AGAP004108 / 1273932 VectorBaseID:AGAP004108 Length:360 Species:Anopheles gambiae


Alignment Length:365 Identity:90/365 - (24%)
Similarity:143/365 - (39%) Gaps:60/365 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 ARRDMQLNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYF-SWKKD------DSSIPS-- 677
            |....|.:..||.::  |..|:.:::.|. |:|...|..::..|. .|:|.      :|:|.|  
Mosquito    10 AANAQQASTASPSIV--FISPEQIKDIGE-QVTLNCSIANVKNYIVGWQKSNRDRTKESNIISLG 71

  Fly   678 ----------SLQITEKKEEFYSLLVFKDISARHSGKYTCYAS-NAAAKVNYTAELQVRVAPRWR 731
                      .|..|::......:|...||....:|.|.|... |:.:|:..|.||||| .|...
Mosquito    72 VQLAVTEDRFRLNFTKENNAANYVLEIHDIVNTDAGLYECQIQVNSTSKITKTVELQVR-HPPML 135

  Fly   732 YEPMDTAIML---GNTISINCEAEGYPIPTITWFKGQGK----GSKDFKPLSMRNHSLLLNLATD 789
            .|...|..:.   |....:.|.|||||.|||:|.:....    |.:.|     ..:.|.||....
Mosquito   136 LENQHTNTLTKAEGEDAQLVCRAEGYPRPTISWRREYNAILPIGGQTF-----TGNELRLNGLRR 195

  Fly   790 NDEGYYMCQATNEIGAGLKKTIRINVNEPARFEQSARNISSRRNDPVTLDCHAKGDEPITIGWTQ 854
            .|.|.|.|.|.|.:|....|||.:.|............::...:..:.::|..:......|.|.:
Mosquito   196 EDRGTYYCTADNGVGRADTKTITLEVEFAPVIRVPRPKVAQALDYDIDVECVVQAFPAPAISWYR 260

  Fly   855 NNGRIDLNNFRFSIAEMKTEKGVDSQLTIGHSDRHDS-GVYRCIAENPYGRAEQIIFLAVQERPD 918
            :..:|. |...:||:::.:...|.:.:...||...:. |.|.|.|.|..|:||            
Mosquito   261 DGKQIH-NGGSYSISQIGSPDDVTTSVVKIHSVAAEHYGDYVCKATNKVGQAE------------ 312

  Fly   919 TPSHLEIFEVGSRTVK---LSWRRPFDGNSP---VLSYLV 952
              :.|.:||.....:.   |.|..  ||.|.   ||.:::
Mosquito   313 --ARLNLFEQNVPNINYSGLKWTN--DGTSTRKVVLGHML 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352 25/109 (23%)
ig 645..712 CDD:278476 18/86 (21%)
IG_like 734..815 CDD:214653 27/87 (31%)
Ig 745..815 CDD:299845 25/73 (34%)
I-set 820..913 CDD:254352 18/93 (19%)
Ig 838..920 CDD:299845 18/82 (22%)
FN3 917..1033 CDD:238020 10/42 (24%)
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP004108XP_312987.5 IG_like 27..129 CDD:214653 24/102 (24%)
Ig 35..130 CDD:299845 24/95 (25%)
IG_like 143..221 CDD:214653 26/82 (32%)
IGc2 148..210 CDD:197706 22/66 (33%)
I-set 226..317 CDD:254352 19/105 (18%)
Ig 244..316 CDD:143165 18/86 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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