DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP002325

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_312645.4 Gene:AgaP_AGAP002325 / 1273644 VectorBaseID:AGAP002325 Length:423 Species:Anopheles gambiae


Alignment Length:448 Identity:107/448 - (23%)
Similarity:163/448 - (36%) Gaps:122/448 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   503 HLNISHVRPDDGGLYKCVASNSMGSVQ-HSARLNVYGPPYVRAI---GPIKAVAGEDIIVHCPFA 563
            :|.||.:.|.|.|.|.|..|:.:...| |:..:.|  ||.||||   |.:.|..|..:.:.|..:
Mosquito    33 NLEISELEPQDAGDYVCQISDKVNKDQVHTVEILV
--PPSVRAIPPTGQVTARKGGAVTLECKAS 95

  Fly   564 GYPVEQIRWEKAHQELTTSNHYELASVADGGQLVIKNVEPGRDQ-GIYTCIVRSRAGEEARRDMQ 627
            |.||..|.|.|     .|......|.:.:|..|.::.||  |.| |:|.|...:..||....||:
Mosquito    96 GNPVPSIYWTK-----RTGTGKSAAKIGEGPVLSLERVE--RQQAGVYQCTADNSVGEPVTVDMR 153

  Fly   628 LNVNSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKK----EEF 688
            |:|..||.|...|...:..||..||:.|.|.:...|. .||  :.:|.|  ||.|:::    ...
Mosquito   154 LDVLYPPDISVEKSWIHSGEGFEAQLECIVHADPQPT-VSW--NQNSFP--LQPTDRRTMSSRGN 213

  Fly   689 YSLLVFKDISARHSGKYTCYASNAAAKVNYTAELQVR------VAPRWRYEPMDTAIMLGNTISI 747
            ...|..:.:.....|.|:|.|.|:..:.....|:..|      ::|.|....        ::.::
Mosquito   214 RHTLTIRHVQQEDFGNYSCVADNSLGRSKKYMEVSGRPGPADFLSPPWSRST--------DSFNL 270

  Fly   748 NCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAGLKKTIR 812
            ..:.|.||                  ||                         .|:....:|   
Mosquito   271 TWKVESYP------------------PL-------------------------QEVRLLYRK--- 289

  Fly   813 INVNEPARFEQSARNISSRRNDPVTLDCHAKGDEPITIGWTQNNGRIDLNNFRFSIAEMKTEKGV 877
            :.:||  .|:|     ..|.:|.:.........||:|            :...|::..::     
Mosquito   290 LMMNE--TFQQ-----PGRWHDVILTPAPRPPSEPLT------------HVMAFTLRGLQ----- 330

  Fly   878 DSQLTIGHSDRHDSGVYRCI--AENPYGRAE-QIIFLAVQERPDTPSHLEIFEVGSRT 932
                        .|.||..|  |:|.||..| ..||....:|..:..|.|..:|.|.|
Mosquito   331 ------------HSSVYEAIVQAKNRYGWNEVSDIFQFYTQRITSDIHSEEMQVASST 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165 11/30 (37%)
IGc2 553..619 CDD:197706 19/66 (29%)
I-set 634..724 CDD:254352 24/93 (26%)
ig 645..712 CDD:278476 19/70 (27%)
IG_like 734..815 CDD:214653 7/80 (9%)
Ig 745..815 CDD:299845 7/69 (10%)
I-set 820..913 CDD:254352 19/95 (20%)
Ig 838..920 CDD:299845 16/84 (19%)
FN3 917..1033 CDD:238020 5/16 (31%)
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP002325XP_312645.4 IG_like <6..67 CDD:214653 11/33 (33%)
Ig <6..63 CDD:143165 11/29 (38%)
Ig 69..145 CDD:299845 26/82 (32%)
IG_like 78..146 CDD:214653 21/74 (28%)
IG_like 159..248 CDD:214653 25/93 (27%)
IGc2 173..239 CDD:197706 20/70 (29%)
FN3 264..358 CDD:238020 28/183 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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