DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP000659

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_311185.5 Gene:AgaP_AGAP000659 / 1272415 VectorBaseID:AGAP000659 Length:2177 Species:Anopheles gambiae


Alignment Length:2423 Identity:529/2423 - (21%)
Similarity:853/2423 - (35%) Gaps:711/2423 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LRVPTFLLEPAPRLLFGNDTGAQV-TCTAHGSPPPLVTWVLRDGSLATQVPGLRKISGNGTLHFP 98
            |:.|.|..:|:......|:...:: .|.|.|.|.|...| |::|     ||     .||      
Mosquito     3 LQAPRFTTQPSSSGSIVNEGRTKILQCHALGFPQPTYRW-LKNG-----VP-----VGN------ 50

  Fly    99 PFLAQYY-------RTDVHEATYRCRASNEAGTVLSRNVQVHAVVRRQFHVHVENTE----VYLG 152
             |.:..|       |.|.  .:|:|.|||:|||:.|..:.   ||.....|.|:.:|    |..|
Mosquito    51 -FSSSQYLKILNITRDDA--GSYQCEASNKAGTIFSEKID---VVVAYMGVFVDQSESIISVASG 109

  Fly   153 NSALIKCAIPEYV-RPYVRVASWHRGE---EILLPDLSDVAGRYVVLAA-SGDLYVRSVRSEDGL 212
            ..|::..:..|.| .|.|   :|...|   |..:......:.:.::|:| .||  :|:.|:.   
Mosquito   110 YPAILNLSFIESVPSPSV---TWQTDEGPLEYNIKYAQTSSNQLIILSADEGD--IRAYRAR--- 166

  Fly   213 MKFSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRTTQKPVMEIH-----VERG-NDVHLPCNIQ 271
                  ..||..|..:.:..|.|.|   :.|  |.|...|.:.:|     |.|| ..|.|.|...
Mosquito   167 ------AFNTQIGREESTGFVRLNV---TGN--PYTEIAPEIIVHPQNTKVVRGAQTVELECIAN 220

  Fly   272 GNPFPIFTWYRVSDSAALYPIPS-----SQRVILSRTLLLIKNADERDAGKWICQASNQFGEQRI 331
            ..|........:.|.   .||.:     :|....:||:.|: :.:....|::.||...:.|...|
Mosquito   221 ARPLHELETIWLKDG---IPIENTGIHYTQTDPWNRTVTLL-HVNLTHTGEYTCQVQMRTGGHPI 281

  Fly   332 EIRLSVNSYVSVHILP------QVQIVNSGGTAN-FNCTTTGSAIDAIDWLHNGKPLQANNALTT 389
            ...:   :.|:|...|      :.:.:...|:.. ..|...|..:..|.|..|..|::.    ..
Mosquito   282 VFSM---AQVTVQEPPTFVTPLRTETLGEYGSRTVLACDVIGEPLPKITWFKNAWPIEQ----VA 339

  Fly   390 GRDNIRFLSKSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQNVRPGP 454
            ||..::  ..:||.:..:|..|..::|||..|:.....|...||:..::|.:....:.|.:..|.
Mosquito   340 GRYTVQ--DDNSLEIYKLGMDDTAMFQCLATNEAGEKSAYTWLKVKTSIPFMEIPPVNQTILDGK 402

  Fly   455 LISLKCSASGSPPPQFAWLL-DSQPIMDVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYK 518
            ..::.|.|..:|.|...|:. |:.||...|..      |.:| |||::    ||:||..|||||.
Mosquito   403 DATMNCRAIAAPTPSIQWIFNDTYPIETSSRM------QILD-SGDLL----ISNVRETDGGLYT 456

  Fly   519 CVASNSMGSVQHS------ARLNVYGPPYVRAIGPIKAVAGEDIIVHCPFAGYPV--EQIRWEKA 575
            |:..|..|.|..|      .|..:..||     .....:.|....:.|..:..|.  ..|.|.:.
Mosquito   457 CIRENEAGRVIGSGYLTVLVRTQINRPP-----ADTTVLLGHSAALECGVSSDPTVPYNIDWYRE 516

  Fly   576 HQELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIE-PF 639
            ...|...|...: .|...|.|.|..|.|. |.|.|:|||.|..|.|. |..:|:     ||| ||
Mosquito   517 PNRLPIKNSQRI-GVKKDGTLEITEVRPS-DVGQYSCIVTSPGGNET-RSARLS-----VIELPF 573

  Fly   640 KFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGK 704
            . |.|:|   ..::|   :..:..|..||..........::...::.|...|....|...    .
Mosquito   574 A-PSNVQ---AVRLT---TPQNRAINVSWTPGFDGNSKIIKFIIQRREVPELGPLPDPLL----N 627

  Fly   705 YTCYASNAAAKVNYTAELQVRVAPRWRY-----------EPMDTAIMLGNTISINCEA-EGYPIP 757
            :....:|.:|:..:.....::.|..:::           .|.|.:    |.:.:..|| .|.|: 
Mosquito   628 WVTEVANVSAQAKWMLLTNLKAATAYQFRISSVNRVGEGSPSDPS----NVVKLPQEAPSGPPV- 687

  Fly   758 TITWFKGQGKGSKDF------------------------------KPLSMRN-------HSLLLN 785
               .|.|..:.|.:.                              .|.:.||       :.|:..
Mosquito   688 ---GFVGSARSSTEIIIQWQPPLEEHRNGQIHGYIIRYRLFGYNESPWNYRNITNEAQRNYLIQE 749

  Fly   786 LATDNDEGYYMCQ--ATNEIGAGLKKTIRINVNEPARFEQSARNISSRRN----DPVTLDCHAKG 844
            |.|..|   |:.:  |.|.:|.|:             :...|: |.::..    .|..:...|..
Mosquito   750 LITWKD---YVIEIAAYNNMGVGV-------------YTDGAK-IKTKEGVPEAPPTGVRVQAIN 797

  Fly   845 DEPITIGWT-QNNGRIDLNNFRFSIAEMKTEK------GVDSQLTIGHSDRHD------------ 890
            ...|.|.|| .|..:|:..|..:.:...:.||      |....:..|..|..:            
Mosquito   798 STAIRIWWTPPNPQQINGINQGYKLQAWRYEKPPTLGAGGGGAIASGAGDDGNELIETEMKVLTV 862

  Fly   891 ---------------SGVYRCIAEN--------PYGRAEQIIFLAVQ---ERPDTPSHLEIFEVG 929
                           ||:.:..|.|        | |..|:.:.:.||   :.||..|.|:...|.
Mosquito   863 PPNLLDPLAEQSEVLSGLEKYTAYNITVLCFTDP-GDGERSVPVPVQTLEDVPDEVSSLQFSGVS 926

  Fly   930 SRTVKLSWRRPFDGNSPVLSYLVQY------QALKYLQ----------------SHGSLAAAGGD 972
            .|.|.::|..|...|..:|.|.::|      :..:::.                :|.:...:|  
Mosquito   927 DREVTVTWDPPRRTNGVLLGYQIRYYVKDLPETARFVNLTATQSRFKVTHLTATTHYTFEVSG-- 989

  Fly   973 WNGHVINVSLPSTSISRS------------------------------YDS-------------- 993
            |.  |:....|..:..:|                              :|.              
Mosquito   990 WT--VVGAGPPKVATIQSGIEPVLPHPPYQLALSNIEAFSVVIQFTPGFDGNSSITSWVVEAQTA 1052

  Fly   994 ---------DLRE----SAIVAGLTPATTFLIRMQAINEIERSAYTEAIV-LKTQEEAPTEAPSN 1044
                     :|::    :..|.||||.||:.:|:.|.|.:.||..:||.. .:|.:..|...|.|
Mosquito  1053 RNLTWFVVHELQDPDASTVTVLGLTPFTTYRLRIIACNVVGRSEPSEATKDFQTIQARPKHPPFN 1117

  Fly  1045 VQVQTGGESELIVTWQIPPRES-WNGELIGYTVNCS--EEKQNINFISVVNSSLKSTIVSGWATT 1106
            |.|:....:||.|.| ||.::: |.|...||.:...  .|.:.......:.:||:.:..|.|::.
Mosquito  1118 VTVRAMSATELRVRW-IPLQQTEWYGNPRGYNITYRNIHESETFGSAESIATSLEDSEKSIWSSG 1181

  Fly  1107 KA-----------TLRGLRKYSRYAVTIRAMNSFGSGPWSAAIFGTTAEGVPEAAPQNVNCTALS 1160
            ::           .|.||.::|.|.:.:.|:|..|....|...|..|.|.||...|..|...|.|
Mosquito  1182 RSVMIEDPTANSHVLDGLEEWSVYEIAMTAVNEVGESIDSPHAFERTREAVPSMGPAGVEANATS 1246

  Fly  1161 SQSLKISWLEPPLQFHGGIIQGYKILY------RPIVHQIDFPAKLEIKRTSNLETYLHTLHKAS 1219
            |.::.:.|.|.|.....|.|:||::.|      .|::|:       .|.......|.|..|.|.:
Mosquito  1247 STTIVVRWTEVPKVHRNGQIEGYRVYYGSVAGRTPVLHK-------TIANNYTFTTTLTELKKFT 1304

  Fly  1220 NYSIRVLAYTATGDG-LASHPLFCQTDDDVPDAPAAIKAAALTADSILISWLTPKNRNGIISHYT 1283
            .|.|:|||||..||| |::.|:..||.:|.|.||:.:....::.....|.|..|:..||.|..|.
Mosquito  1305 QYDIQVLAYTRLGDGALSTPPVRIQTFEDSPGAPSNVSFPDVSFSMARIIWDVPEEPNGEILAYR 1369

  Fly  1284 VYSREAGRKGQAKTHMVRVDEN-----GYPV---TFESRSLAENQMYEFWVSASTSVGEGEPTSV 1340
            |            |:::...:|     .:|.   ||.:..|...:.|.|.|:|.|.:|.|:..:.
Mosquito  1370 V------------TYLLNGSQNLNFTQEFPPSDRTFRATQLLAERYYLFSVTAQTRLGWGKTAAA 1422

  Fly  1341 IAQATNTRAPARIASFGQVVRKAVGTGLVLECLAVGNPTPRARWLTRDRPVTFSP--FYEV---T 1400
            :...||.|...:..|..|:.|..|.:..:......|          ||   .|:|  :|.|   .
Mosquito  1423 LVYTTNNRQIPQAPSAPQISRSQVQSEQITFSWTPG----------RD---GFAPLRYYSVQLRE 1474

  Fly  1401 NEGNLKI--HRVEGSLSGNYTCT-------------ANNLFGSDEIQYQVIAMKP-PSAPQ---- 1445
            |||:..:  .||:..:: :||.|             |.|..|......:.:.::. |:||.    
Mosquito  1475 NEGSWMLIPERVDPDVT-SYTATRLKPHTYYQFRIQATNDLGPSSYSRESVQIRTLPAAPSEGIT 1538

  Fly  1446 -IIVQYASADSIRVSWDA--PD--DGGAPLQGYTISYHTAGESWSITELLPENNAFTIS------ 1499
             :.|...:..|:||.|.|  |.  :|.|...||.|.|....:..|..:..|:.:...::      
Mosquito  1539 GLKVVPITTTSVRVQWVALRPSAWNGDAETGGYRILYQPLSDFPSTLQSTPKMDVLGVNQVSAVL 1603

  Fly  1500 -GLKCGNQYIIKMSAHNMVGSGVASEEINVWTKGKASQ--APNANELIATNATCVNLKLSSW--- 1558
             .|.....|.|.:...|..|||..|..:.|:. |:|..  .|...|..|.::|.|:|:   |   
Mosquito  1604 VDLTQDRNYEIILQPFNSQGSGPPSSPVAVYV-GEAVPIGEPLDIEGKAISSTEVSLR---WNPP 1664

  Fly  1559 ----QNG---GCSIHHFSIEHRPLGDIRWTVVTSD---ISNAEE--------NRENLIFCDFLPA 1605
                |||   |..|.:...:..          |.|   :..|||        |..||:|.|    
Mosquito  1665 QQNTQNGELLGYKIFYLVTDSS----------TQDLDPVPAAEEIEVVPASYNTHNLVFLD---- 1715

  Fly  1606 KW--YQLRISATNDAGKTTEHYHFSTTNIDGITIPPPSVFPSENDLMNNLINSTNPTSGDWFATL 1668
            |:  |:::|.|.|.||........:...:.|:..||..:..|:                      
Mosquito  1716 KYTEYRIQILAFNPAGDGPRSAPITVKTMAGLPGPPTQLHFSD---------------------- 1758

  Fly  1669 IVVVIITVSIITIALTIKHRRT--LCGPIAEGYESRTLPGDYKEDHE---NRRNQQVYSASPV-- 1726
                 ||::.:|::..:..:|.  :.|.|. .||:       .||:|   .:..|:|...|.:  
Mosquito  1759 -----ITMNSLTVSWDLPRKRNGLIVGYIV-AYET-------TEDNEKFSKQVKQKVTGTSLIVQ 1810

  Fly  1727 --------------KTVDKGNESEMYEISPYATFSVNGGRTGAP--------------------- 1756
                          :|:|.|.     .||...|.....|..|:|                     
Mosquito  1811 NLEEEVTYTFTVRAQTIDYGP-----AISGNVTTGPQEGSPGSPRDLMISKSQASVQMHWINGQS 1870

  Fly  1757 AKTP-----------------TRAVAAQTPL-DYTMQFKTFGHPEGENLNATAYP---------- 1793
            .|.|                 |.|.:...|: ::|:.|:..       |.:|||.          
Mosquito  1871 GKGPILGYYIESKKRDDLRWETVARSTNGPIQEFTVSFQNL-------LPSTAYKFRVISYNRYG 1928

  Fly  1794 -----------LLPSS---GFGH--------------------------------VKSKSSWHKQ 1812
                       |.||.   .:|:                                |||||..:||
Mosquito  1929 ISCPVYSDDAVLTPSKLYLEYGYLQLKPFYRQTWFMVALAATSIVIVIMVIAVLCVKSKSYKYKQ 1993

  Fly  1813 RYYNTEDESTLSKSMTIVAGSQ-AGHSKKSNGGRSAKSSAACSGV--VAGSESDTSIS-PSTEFS 1873
            ....|.:||.   :|:|....: |....:|..|.||  :.|.:|:  |:|:...:::. |:....
Mosquito  1994 EVQKTLEESI---AMSIDERQELALELYRSRHGVSA--NGAANGITGVSGTMIHSTLGRPAASLG 2053

  Fly  1874 NMPTYRVPCKSSRSSDGRAV--VDMFRPDSS-TESNNDQGSPAPERRHNTPRHVLGMGMAMGLGG 1935
            ..|....|...:..||..::  .|....||| ||..::..|                        
Mosquito  2054 KSPPRPSPASVAYHSDEESLKCYDENPDDSSVTEKPSEMSS------------------------ 2094

  Fly  1936 GGGGGVGGGNGPAEKRSAGQRSRKHGSAAQQPSNQTLE---RRKCPGSSNSLDSEVDAETAASLA 1997
                   ..:..:|..:...||..|.......:|..|.   :|:.|..:.|..::.|.|.:|.::
Mosquito  2095 -------SDSQASESENESVRSDPHSFVNHYVNNDLLRQSWKRQKPVRNYSSYTDSDPEGSAVMS 2152

  Fly  1998 ASIAAMAGSGAGADLSGG 2015
                          |:||
Mosquito  2153 --------------LNGG 2156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652 25/84 (30%)
Ig 56..125 CDD:143165 23/76 (30%)
I-set 246..337 CDD:254352 23/101 (23%)
Ig 264..334 CDD:143165 16/74 (22%)
I-set 345..433 CDD:254352 19/94 (20%)
Ig 358..431 CDD:143165 17/73 (23%)
Ig 456..533 CDD:143165 28/83 (34%)
IGc2 553..619 CDD:197706 20/67 (30%)
I-set 634..724 CDD:254352 17/90 (19%)
ig 645..712 CDD:278476 8/66 (12%)
IG_like 734..815 CDD:214653 22/120 (18%)
Ig 745..815 CDD:299845 19/109 (17%)
I-set 820..913 CDD:254352 23/138 (17%)
Ig 838..920 CDD:299845 24/126 (19%)
FN3 917..1033 CDD:238020 35/195 (18%)
FN3 1040..1142 CDD:238020 29/115 (25%)
fn3 1150..1237 CDD:278470 31/93 (33%)
FN3 1263..1345 CDD:238020 21/89 (24%)
Ig 1350..1436 CDD:299845 22/105 (21%)
IG_like 1358..1436 CDD:214653 21/97 (22%)
FN3 1441..1530 CDD:238020 27/104 (26%)
FN3 1542..1620 CDD:238020 27/100 (27%)
AgaP_AGAP000659XP_311185.5 I-set 6..84 CDD:254352 28/97 (29%)
IGc2 21..79 CDD:197706 21/77 (27%)
I-set 195..290 CDD:254352 22/101 (22%)
IGc2 211..273 CDD:197706 14/65 (22%)
Ig 293..382 CDD:299845 20/94 (21%)
I-set 294..382 CDD:254352 20/93 (22%)
IG_like 393..474 CDD:214653 30/91 (33%)
IGc2 401..464 CDD:197706 26/73 (36%)
Ig 484..568 CDD:299845 25/96 (26%)
IG_like 484..568 CDD:214653 25/96 (26%)
FN3 575..675 CDD:238020 16/113 (14%)
FN3 684..779 CDD:238020 19/115 (17%)
FN3 787..909 CDD:238020 22/122 (18%)
FN3 914..998 CDD:238020 17/87 (20%)
FN3 1012..1101 CDD:238020 15/88 (17%)
FN3 1114..1228 CDD:238020 29/114 (25%)
FN3 1237..1330 CDD:238020 32/99 (32%)
FN3 1335..1427 CDD:238020 24/103 (23%)
FN3 1433..1528 CDD:238020 22/108 (20%)
fn3 1538..1628 CDD:278470 22/89 (25%)
FN3 1642..1743 CDD:238020 29/117 (25%)
FN3 1748..1839 CDD:238020 22/130 (17%)
FN3 1846..1935 CDD:238020 13/95 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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