DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP000218

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_310916.5 Gene:AgaP_AGAP000218 / 1272049 VectorBaseID:AGAP000218 Length:884 Species:Anopheles gambiae


Alignment Length:512 Identity:121/512 - (23%)
Similarity:180/512 - (35%) Gaps:85/512 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   453 GPLISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSG-DVIS----------HLNI 506
            |..::|.|... |...|..|..|.           |.:|...::|| |..|          .|.|
Mosquito    56 GSRVTLPCRVE-SKVGQLQWTKDD-----------FGLGWHRNLSGFDRYSMVGSDEEGDYSLEI 108

  Fly   507 SHVRPDDGGLYKCVA----SNSMGSVQHSARLNVYGPPYVRAIGPIKAVAGE--------DIIVH 559
            ..:..||...|:|..    ..:.|.....|.|.|..||     .|.|.|.|:        :|.:.
Mosquito   109 YPLMLDDEARYQCQVGRGKDGTPGIRSSFATLTVLVPP-----EPPKIVQGDFLVTTEDREIELE 168

  Fly   560 C-PFAGYPVEQIRWEKAH-QELTTSNHYELASVADGGQLVIKNV---EPGRD--QGIYTCIVRSR 617
            | ...|.|..:|.|...| ..||....|....:.|.|:...|::   .|.::  ...:||..::.
Mosquito   169 CVSVGGKPAAEITWIDGHGTVLTKGIEYVKEPMGDTGRFTAKSILKLTPKKEHHNTSFTCQAQNT 233

  Fly   618 AGEEARR-DMQLNVNSPP-----VIEPFKFPKNLQEGGRAQITCAVSSGDMPIYFSWKKDDSSIP 676
            |....|. .::|.|...|     |:........:.||...:::|...:....:.:.|.:.|..|.
Mosquito   234 ADRTYRSVRLKLEVKYAPKVSVSVVGGALAGGRIPEGAEVRLSCRADANPSDVTYRWYRADEPIV 298

  Fly   677 SSLQITEKKEEFYSLLVFKDISAR-HSGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIM 740
            .         ::.:.||..::|.. |.....|...||..|...:..|.:...|.:|..|......
Mosquito   299 G---------DYTTELVIHNVSKEYHDAVIKCEVHNAVGKSEESEILDISYGPTFRTRPQSVETD 354

  Fly   741 LGNTISINCEAEGYPIPTITWFKGQGKGSKDFKPLSMRNHSLLLN---LATDNDEGYYMCQATNE 802
            |...:::.|:.:|.|.|.|.|...:          |.|..|...|   :||....|.|.|:|:..
Mosquito   355 LDRKVTLACDVDGNPPPEIIWVHEE----------SGRIVSSSANITLMATRETAGRYCCKASVR 409

  Fly   803 IGAGLKKTIRINVNEPARFEQSARNISSRRNDPVTLDCHA----KGDEPITIGWTQNNGRIDLNN 863
            ....::.|..|.:..|... :|.|......||...:.|.|    |..:.|   ||.|...:...|
Mosquito   410 GFPDIEATAAIQLKGPPTI-RSPRQQYGSVNDNSQIQCDAIAIPKAKQVI---WTYNGLEVSGEN 470

  Fly   864 FRFSIAEMKTEKGVDSQLTIGHSDRHDSGVYRCIAENPYGRAEQIIFLAVQERPDTP 920
             ..:|.|..:.:||.|.|.|..|.|...|||.|...|.||.....|..|..|....|
Mosquito   471 -EHTILENHSPEGVRSTLIIPKSKRQHFGVYNCTVLNEYGSDSLEIQFAPMESSSLP 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165 19/91 (21%)
IGc2 553..619 CDD:197706 17/80 (21%)
I-set 634..724 CDD:254352 17/95 (18%)
ig 645..712 CDD:278476 11/67 (16%)
IG_like 734..815 CDD:214653 20/83 (24%)
Ig 745..815 CDD:299845 18/72 (25%)
I-set 820..913 CDD:254352 29/96 (30%)
Ig 838..920 CDD:299845 27/85 (32%)
FN3 917..1033 CDD:238020 1/4 (25%)
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP000218XP_310916.5 IG_like 48..142 CDD:214653 22/97 (23%)
Ig 52..144 CDD:299845 23/99 (23%)
C2-set_2 149..239 CDD:285423 20/89 (22%)
Ig_3 250..325 CDD:290638 13/83 (16%)
I-set 342..423 CDD:254352 22/90 (24%)
Ig 343..>396 CDD:299845 14/62 (23%)
Ig 424..516 CDD:299845 29/96 (30%)
IG_like 431..516 CDD:214653 27/88 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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