DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and AgaP_AGAP009518

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_310174.4 Gene:AgaP_AGAP009518 / 1271391 VectorBaseID:AGAP009518 Length:464 Species:Anopheles gambiae


Alignment Length:451 Identity:117/451 - (25%)
Similarity:174/451 - (38%) Gaps:126/451 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   653 ITCAVSSGDMP-IYFSWKKDDSSIPSS----LQITEKKEEFYSLLVFKDISARHSGKYTCYASNA 712
            :||  |..|.| :...|:...::|.|.    :.|.:|.:..  .|:|:.|:....|.:||     
Mosquito    45 VTC--SHPDHPEVRLKWRNPKNAIISETKGRVHIEDKGDSL--ALIFEAIARTDQGNWTC----- 100

  Fly   713 AAKVNYTA---ELQVRVAPRWR-------YEPM---DTAIMLGNTI---------SINCEAEGYP 755
            ...|..||   |.:|.| |..|       |||:   ||     ||:         :|.||.:|:|
Mosquito   101 EVDVEGTATATEGRVTV-PALRKSFKMIVYEPISFRDT-----NTVQTAVEDKDATIRCEVKGHP 159

  Fly   756 IPTITW-FKGQ----------GKGSKDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIGAGL-- 807
            .|:::| |.||          |:.||....:|::.       ...||.|.|.|:|......|.  
Mosquito   160 EPSVSWYFNGQPLFCKLFSNNGRYSKLADGMSIKK-------VVQNDSGEYTCKAFQISATGSSF 217

  Fly   808 -KKTIRINVNEPARFEQSARNISSRR---NDPVTLDCHAKGDEPITIGWTQNNGRIDLNNFRFSI 868
             :||||:|:..........::||...   ...|.|.|.|..:.|....|:.||.::         
Mosquito   218 EEKTIRLNIKHKPYMPPWKKSISDAYGYVGGMVNLTCEATAEPPANFSWSANNKKL--------- 273

  Fly   869 AEMKTEKGVDSQLTIGHSDRHDS------------GVYRCIAENPYGRAEQIIFLAVQERPDTPS 921
                |.|.     .|.::.||.|            |.|:|.|:|..|...|.|.|....:||.||
Mosquito   274 ----TPKS-----HIIYNGRHVSMLQIMIKTSSIFGKYKCEAKNELGSVTQEIHLKEGTKPDPPS 329

  Fly   922 HLEIFEVGSRTVKL------SWRRPFDGNSPVLSYLVQYQAL-KYLQSHGSLAAAGGDWNGHVIN 979
            ..::..|.|.|:.:      |...|.|..: |:.|..:.... :||:|.        .|: |.  
Mosquito   330 LFQLRGVNSDTLDIDVGATKSHDIPPDPTT-VIGYRFELMPTDEYLKSR--------SWD-HA-- 382

  Fly   980 VSLPSTSISRSYDSDLRESA--IVAGLTPATTFLIRMQAINEIERSAYTEAIVLKTQEEAP 1038
                    ||. |.|:.:.|  ::..|.|.|.:|||:.|.|....|.:||.....|....|
Mosquito   383 --------SRR-DFDVADGATYLLVQLIPDTKYLIRVAARNAAGLSDWTEVKEFSTHPVQP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352 20/78 (26%)
ig 645..712 CDD:278476 16/63 (25%)
IG_like 734..815 CDD:214653 30/106 (28%)
Ig 745..815 CDD:299845 25/92 (27%)
I-set 820..913 CDD:254352 25/107 (23%)
Ig 838..920 CDD:299845 24/93 (26%)
FN3 917..1033 CDD:238020 33/124 (27%)
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
AgaP_AGAP009518XP_310174.4 IG_like 45..117 CDD:214653 21/80 (26%)
Ig <67..102 CDD:299845 9/41 (22%)
IGc2 145..207 CDD:197706 19/68 (28%)
IG_like 240..320 CDD:214653 23/97 (24%)
Ig 250..318 CDD:143165 21/85 (25%)
FN3 325..429 CDD:238020 33/124 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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