DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and Bsg

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:NP_033898.1 Gene:Bsg / 12215 MGIID:88208 Length:389 Species:Mus musculus


Alignment Length:341 Identity:71/341 - (20%)
Similarity:121/341 - (35%) Gaps:109/341 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   544 AIGPIKAV------AGEDIIVHCPFAGYPVEQIRW--------------------EKAHQELTTS 582
            |.|.:||.      ||..:::||...|.|:.:|:|                    ::.|......
Mouse    22 AAGFLKAPLSQERWAGGSVVLHCEAVGSPIPEIQWWFEGNAPNDSCSQLWDGARLDRVHIHAAYR 86

  Fly   583 NHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPP------------V 635
            .|...:...||        ....|.|.|.|    ||..:..|:   ::..||            |
Mouse    87 QHAASSLSVDG--------LTAEDTGTYEC----RASSDPDRN---HLTRPPRVKWVRAQASVVV 136

  Fly   636 IEPFKFPKNLQE-GGRAQITCAVSSGDMPIY-FSWKK-----DDSSIPSSLQITEKKEEFYSLLV 693
            :||.....::|| ..:.|:||:::|..:.|. ..|.:     .:.::|                 
Mouse   137 LEPGTIQTSVQEVNSKTQLTCSLNSSGVDIVGHRWMRGGKVLQEDTLP----------------- 184

  Fly   694 FKDISARH-------SGKYTC-YASNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCE 750
              |:..::       ||:|:| :......:    :|:.|...||.:..........|....:.|:
Mouse   185 --DLHTKYIVDADDRSGEYSCIFLPEPVGR----SEINVEGPPRIKVGKKSEHSSEGELAKLVCK 243

  Fly   751 AEGYPIPTIT---WFKGQGKGSKD-----------FKPLSMRNHSLLL--NLATDNDEGYYMCQA 799
            ::. ..|.||   |||....|.::           :..:|....|.|.  ||..:.|.|.|:|.|
Mouse   244 SDA-SYPPITDWFWFKTSDTGEEEAITNSTEANGKYVVVSTPEKSQLTISNLDVNVDPGTYVCNA 307

  Fly   800 TNEIGAGLKKTIRINV 815
            ||..|. .::||.:.|
Mouse   308 TNAQGT-TRETISLRV 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352
Ig 264..334 CDD:143165
I-set 345..433 CDD:254352
Ig 358..431 CDD:143165
Ig 456..533 CDD:143165
IGc2 553..619 CDD:197706 16/85 (19%)
I-set 634..724 CDD:254352 19/116 (16%)
ig 645..712 CDD:278476 14/81 (17%)
IG_like 734..815 CDD:214653 24/96 (25%)
Ig 745..815 CDD:299845 23/85 (27%)
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
BsgNP_033898.1 ig 27..111 CDD:278476 19/95 (20%)
IG_like 29..113 CDD:214653 18/95 (19%)
IG_like 233..322 CDD:214653 24/90 (27%)
Ig 238..319 CDD:143165 22/82 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..389
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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