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Protein Alignment Dscam3 and igsf10

DIOPT Version :9

Sequence 1:	NP_996226.2	Gene:	Dscam3 / 42103	FlyBaseID:	FBgn0261046	Length:	2087	Species:	Drosophila melanogaster
Sequence 2:	XP_012819117.2	Gene:	igsf10 / 100494018	XenbaseID:	XB-GENE-6072998	Length:	2884	Species:	Xenopus tropicalis

Alignment Length:	989	Identity:	243/989 - (24%)
Similarity:	389/989 - (39%)	Gaps:	210/989 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    25 LATPLLATSGLRVPTFLLEPAPRLLFG--------NDTGAQVTCTAHGSPPPLVTWVLRDGSL-- 79
            :|...|.:..|.|...::...||:|.|        :.....|.|.|.|||.|.:||.|::.::
Frog  1981 VANNQLGSDRLLVTLSVITYPPRILQGRSREITVHSGNSVNVNCQAEGSPFPTITWTLKNETIPF 2045

  Fly    80 ATQVPGLRKI--SGNGTLHFPPFLAQYYRTDVHEATYRCRASNEAG-TVLSRNVQVHA----VVR 137
            .|.... |||  ..:|||.....      |......|||.|:|.|| ...:..:||.|    :|.
Frog  2046 GTSTSN-RKIFVQPDGTLIIKDV------TVYDRGIYRCLATNLAGEDTFTVRIQVIAAPPVIVE 2103

  Fly   138 RQFHVHVENTEVYL---GNSALIKCAIPEYVRPYVRVASWHRGEEILLPDLSDVAGRYVVLAASG 199
                   |..:..|   |.:..|.|......:|.|.   |...:...:..|..|..: :.|.::|
Frog  2104 -------EKRQTVLAGPGENLKIPCTAKGNPQPTVH---WVAFDGTKIKPLQYVNAK-LFLFSNG 2157

  Fly   200 DLYVRSVRSED-GLMKFSCLVTNTLNGERQRSDAVMLQVKELSK--NLAPRTTQKPVMEIHVERG 261
            .||:|:|.|.| |  .:.|:.|::...||:..:.::.|.....|  :.:|:.|:       :..|
Frog  2158 TLYIRNVASTDRG--NYECIATSSTGSERRVVNLIVEQSDTFPKITDASPKATE-------MNFG 2213

  Fly   262 NDVHLPCNIQGNPFPIFTWYRVSDSAA---LYPIPSSQRVILSRTLLLIKNADERDAGKWICQAS 323
            :.:.|.|...|.|.|...| |:...|.   |:.:.|..:|..:.| |.:.:.:::|||.::|.|.
Frog  2214 DKLMLNCTATGEPKPRIIW-RLPSKAVVDQLHRMGSRIQVFPNGT-LFVDSVNDKDAGDYLCVAR 2276

  Fly   324 NQFGEQRIEIRLSVNSYVS--VHILPQVQIVNSGGTANFNCTTTGSAIDAIDW-LHNGKPLQANN 385
            |:.|:..|.:::||....:  :...|..:.|..|.....:|..:||.:..|.| |.:|..:  ||
Frog  2277 NKMGDDVILMKVSVTMKPAKIIQKQPLAKQVPYGKDFKVDCKASGSPLPDISWSLPDGTMI--NN 2339

  Fly   386 AL---TTGRDNIRFL--SKSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTF 445
            .|   .:||...|::  ...:|.:..||..:.|.|.|..|||....:....:.:....|     .
Frog  2340 ILQADDSGRRKRRYILFDNGTLYLNKVGIAEEGDYTCYAENQLGRDEMKVHITVVTAAP-----L 2399

  Fly   446 IEQNVR------PGPLISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISHL 504
            |:.|::      .|..:.|.|.|:|.|.|:..|||.|..::.:| |.|:.:.:    :|.    |
Frog  2400 IKLNMKTRYAAMAGESVILDCEANGEPKPKIFWLLPSSDMIAIS-HDRYLLHE----NGS----L 2455

  Fly   505 NISHVRPDDGGLYKCVASNSMGSVQHSARLNVY-GPPYVRAIGPIKAVAGEDIIVH------CPF 562
            .:|.|:..|.|.|.|||.|..|......||.|: .||.:..:...|::..:..|.|      |..
Frog  2456 TVSQVKLLDAGEYMCVARNPAGDDTKLLRLEVHPKPPIINGLYSNKSIIKDTAIKHSRKLIDCKA 2520

  Fly   563 AGYPVEQIRWEKAHQ-ELTTSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDM 626
            .|....|:.|..... .||...|.....|...|.|.|:|:.|. |...:||:.|:..| |:...:
Frog  2521 EGAAPLQVMWIMPDNIYLTAPYHGSRILVHQNGTLEIRNIRPS-DTAEFTCVARNDGG-ESMLVV 2583

  Fly   627 QLNV----NSPPVIEPFKFPKNLQEGGRAQITCAVSSGDMP------------------------ 663
            ||.|    ..|....||......:....|.:.|.......|
Frog  2584 QLEVLEMLRRPMFKNPFNEKFIAKSSKMAILNCFAEGNPTPEIIWLLPNGTRFLNGPSISKYHAG 2648

  Fly   664 -----IYFSWKKDDSSIPSSLQITEKKEEFYSLLVFKDISARHSGKYTCYASNAAAKVNYTAEL- 722
                 |.:|..|||                             :|||.|.|.|   ||.|..:|
Frog  2649 SNGTFIIYSPTKDD-----------------------------AGKYRCAARN---KVGYIEKLI 2681

  Fly   723 --------QVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWF----------KGQGKGS 769
                    .:...||   .|:.:  ::|..:|::|.::|.|.|::||.          :.||:
Frog  2682 ILEVGQKPNILTHPR---GPIKS--IIGEALSLHCLSDGMPRPSVTWILPSGYAIERPQVQGR-- 2739

  Fly   770 KDFKPLSMRNHSLLLNLATDNDEGYYMCQATNEIG-AGLKKTIRINVNEPARFEQSARNISSRRN 833
              :|.|  .|.:|::.....:|.|.|.|:|.|..| ..:..|:.:....|....:..:.|.:|..
Frog  2740 --YKLL--ENGTLVIQETALHDRGNYQCKAKNYAGETAITVTVVVVAYPPRITNKPPQTIHTRAG 2800

  Fly   834 DPVTLDCHAKGDEPITIGW---------TQNNGRIDLNNFRFSIAEMKTEKGVDSQLTIGHSDRH 889
            ..|.|:|.|.|.....|.|         |.:.|.:       :..|:...:|.   |.|.:....
Frog  2801 SAVRLNCMAIGIPKPDIFWELPDLSVLSTASQGSL-------TGTELLHPQGT---LVIQNPQSS 2855

  Fly   890 DSGVYRCIAENPYG 903
            |||:|:|||:|..|
Frog  2856 DSGIYKCIAKNSLG 2869

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.