DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dscam3 and hmcn1

DIOPT Version :9

Sequence 1:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster
Sequence 2:XP_012816895.2 Gene:hmcn1 / 100135378 XenbaseID:XB-GENE-6258572 Length:5519 Species:Xenopus tropicalis


Alignment Length:2002 Identity:429/2002 - (21%)
Similarity:711/2002 - (35%) Gaps:555/2002 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 CTAHGSPPPLVTW--------------VLRDGSL-----------------ATQVPGLRK----- 88
            |.|.||||||:||              :|..|.:                 |..:.|..|     
 Frog  1382 CEASGSPPPLITWYKGRTQVDESATVQILEKGKILKILKMALKDSGHYTCKANNIAGESKKQYFV 1446

  Fly    89 -------ISGNGTLH--------------------FPPFLAQYYRTDVHEATYRCRASNEAGTVL 126
                   |:|.||:.                    ||..  |:::.:      |..::.:...|:
 Frog  1447 NVLDPPTIAGVGTISDVSVIAGREVNLECKVKGIPFPSI--QWFKEN------RLLSTEDPNVVM 1503

  Fly   127 SRNVQVHAVVRRQFHVHVENTEVYLGNSALIKC-------------AIPEYVRPYVRVAS----- 173
            ..|.||         :|::::.  |.:|...||             .:..|:.|.::..:     
 Frog  1504 LENGQV---------LHIKHSR--LSDSGKYKCIAANTAGSQTKEIKLTVYIAPTIKDGNSTTDL 1557

  Fly   174 -----------------------WHRGEEILLPDLSDVAGRYVVLAASGDLYVRSVRSE--DGLM 213
                                   |::..|.|||      ..||.....|. |:|...|:  || .
 Frog  1558 SFTVNGEINLECDARGIPPPTIIWYKDGEPLLP------SPYVTYIQKGK-YLRITESQITDG-G 1614

  Fly   214 KFSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRTTQKPVMEIHVERGNDVHLPCNIQGNPFPIF 278
            .::|.||| :.|:.:::.:|.:.|.........:...|.|:.     |..:.|.|...|:|.|:.
 Frog  1615 TYTCSVTN-VAGQTEKNYSVDIYVPARIHGDEKKHQNKKVIV-----GKSLTLECEATGHPPPLI 1673

  Fly   279 TWYRVSDSAALYPIPSSQRVIL--SRTLLLIKNADERDAGKWICQASNQFGEQRIEIRLSVNSYV 341
            ||  :.|..   |:.::..:.|  :...|.|:|..|.|.|.:.|.|.|..||..::.:      |
 Frog  1674 TW--LKDGV---PVETNDNIRLHYNGKKLEIRNTVEYDRGLYTCVAVNVAGETEMKYK------V 1727

  Fly   342 SVHILPQVQ--------IVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQANNALTTGRDNIRFLS 398
            ||.:.|.::        .|.:.|.....|..:|:.:.::.||.||.|:.     |:||..|: .:
 Frog  1728 SVLVPPSIEGGNDPADHTVIASGAVELECLASGTPLPSVMWLKNGTPVD-----TSGRLIIQ-SN 1786

  Fly   399 KSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLGDTVPELIYTFIEQNVRP--GPL------ 455
            ...||:.:....|.|.|||:|:|:..|:          |....:...:...::|  .|:      
 Frog  1787 GHKLLISSTESSDSGNYQCVVKNEAGSS----------TKQFNVVVHVRPTIKPVASPVSILMHK 1841

  Fly   456 -ISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRF-AIGQFVDMSGDVISHLNISHVRPDDGGLYK 518
             .:|:|.|||.|.|...||.|..|......:.:. :.|:.:.....::          :|.|.|.
 Frog  1842 ATTLQCIASGIPNPHITWLKDGLPFNVAKANIKMESFGRSLQFKKTLL----------EDAGKYT 1896

  Fly   519 CVASNSMGSVQHSARLNVYGPPYVRAIGPI---KAVAGEDIIVHCPFAGYPVEQIRWEKAHQELT 580
            |||:|:.|..:.:..||||.||.:...|.:   ..:|..:||:.|...|.|...:.|.|.:|:||
 Frog  1897 CVATNAAGEAEQTIWLNVYEPPKIENSGELIQETVLANHNIILECKATGNPDPVVTWFKDNQQLT 1961

  Fly   581 TSNHYELASVADGGQLVIKNVEPGRDQGIYTCIVRSRAGEEARRDMQLNVNSPPVIEPFKFPKNL 645
            .:..   .||:|.||::..:.......|.|.|:..|.|| .|.....|.|:.||.|         
 Frog  1962 NTGD---ISVSDRGQVLQISGAQVFHAGTYKCVAASIAG-RAELSYNLQVHVPPSI--------- 2013

  Fly   646 QEGGRAQITCAV---------SSGDMPIYFSWKKDDSSIPS---SLQITEKKEEFYSLLVFKDIS 698
             .|..:.||..|         ::|......:|.||.|.:.|   .:||.....    :|...:..
 Frog  2014 -SGRSSSITVIVNNVVRLECEATGFPAPSLTWLKDGSPVSSFTNGIQILSGGR----VLALTNAQ 2073

  Fly   699 ARHSGKYTCYASNAAAKVNYTAELQVRVAPRWRYEPMDTAIMLGNTISINCEAEGYPIPTITWFK 763
            ...:|||||.|.|||.:.....:|.|.|.|....|..:.:.::..|:.:.||::..|.|.:||: 
 Frog  2074 VGDAGKYTCVAVNAAGEQQTDYDLSVYVPPNIMGEEQNISSLISETLILKCESDAIPPPVLTWY- 2137

  Fly   764 GQGKGSKDFKPLSMR-------NHSLL-LNLATDNDEGYYMCQATNEIGAGLKKTIRINVNEPAR 820
                  ||:|||..|       :.|:| :..|...|.|.|.|:|.| |....:|...:|:..|..
 Frog  2138 ------KDWKPLVNRPGLTISEDGSILKIEGAQVKDTGRYSCEAVN-IAGKTEKNFNVNIMVPPA 2195

  Fly   821 FEQSAR--NISSRRNDPVTLDCHAKGDEPITIGWTQNNGRIDLNNFRFSIAEMKTEKGVDSQLTI 883
            ...||.  .::......::|.|.:.|..|..:.|.:|:..|...    :...::...| ..||.|
 Frog  2196 IRGSAEESEVNIIEGTLISLLCDSTGIPPPALAWKKNDVAIQSG----AAGHIRLLSG-GRQLQI 2255

  Fly   884 GHSDRHDSGVYRCIAENPYGRAEQIIFLAVQERP------DTPSHLEIFEVGSRTVKLSWRRPFD 942
            ..:.:.|:..|.|.|.|..|.|.:...:.|..||      :.||.:.:.:..:.|::...|    
 Frog  2256 ITARKSDAASYTCTASNSVGSAMKKYTVKVYVRPSISESGNHPSEIVVIQGNNVTLECDAR---- 2316

  Fly   943 GN-SPVLSYLVQYQALKYLQSHGSLAAAGGDWNGHVINVSLPSTSISRSY---------DSDLRE 997
            |: .|:|::|  .:.:..:..:|...::    ||.::::.....|.:..|         .|| |:
 Frog  2317 GDPQPMLTWL--KEGIPLISGNGFEISS----NGRLLHLQKAQISNAGLYVCVAVNVAGQSD-RK 2374

  Fly   998 SAIVAGLTPA-TTFLIRMQAINEIERSAYTEAIVLKTQEEAPTEAPSNVQVQTGGESELIVTW-- 1059
            ..:...:.|| ...:::.:.|:.:|::.:|     .|.|.:....|.             |||  
 Frog  2375 YDLKVFVPPAFPDGIMKHENISIVEKNPFT-----LTCEVSGIPPPK-------------VTWYK 2421

  Fly  1060 ---QIPPRESWNGELIGYTVNCSEEKQNINFISVVNSSLKSTIVSGWATTKATLRGLRKYSRYAV 1121
               .|||..|......|:.:..|:            |||..|.....|.:.|....:||:....:
 Frog  2422 DGNPIPPSRSPQIMSGGFLLRFSQ------------SSLSDTGRYTCAVSNAAGEDMRKFDVNVL 2474

  Fly  1122 TIRAMNSFGSGPWSAAIFGTTAE--GVPEAAPQNVNCTALSSQSLKISWLEPPLQFHGGIIQGYK 1184
            .            ...|.|:..|  .|.|.....::|.|..:...:|:||:          .|:.
 Frog  2475 V------------PPKITGSVQEEIKVKERGNITLSCEATGTPIPQITWLK----------DGHP 2517

  Fly  1185 ILYRPIVHQIDFPAKLEIKRTSNLETYLHTLHKASNYSIRVLAYTATGDGLASHPLFCQTDDDVP 1249
            :| ....|:||.  |.::.|.||:     .:..:..|.  .:|....|:...|..|.......:.
 Frog  2518 VL-EDTNHRIDH--KRQLLRISNV-----MMTDSGRYV--CVASNPAGERSRSFSLGVLISPTIK 2572

  Fly  1250 DA----PAAIKAAALTADSILISWLTPKNRNGIISH--YTVYSREAGRKGQAKTHMVRVDENGYP 1308
            .|    |..:|...|::.|:...         :.||  .|:...:.||..:.|.: ||:...|. 
 Frog  2573 GAINGSPEDVKVVLLSSISLECE---------VHSHPPATITWHKDGRLFKFKDN-VRILPGGR- 2626

  Fly  1309 VTFESRSLAENQMYEFWVSASTSVGEGEPTSVIAQATNTRAPARI--------ASFGQVVRKAVG 1365
             |.:.....|.....:...|:...|||.....:    |...|.:|        ..|.:.::..|.
 Frog  2627 -TLQILKAQEKDAGRYSCIATNEAGEGTHHYNL----NVHIPPKIRKDDISEFGGFSKEIKAIVN 2686

  Fly  1366 TGLVLECLAVGNPTPRARWLTRDRPVTFSPFYEVTNEGNLKIHRVEGSLSGNYTCTANNLFGSDE 1430
            |...|.|....||..:..|....:|:.......:.:...|.:.:.:.|.:|.|||.|:|:.|.||
 Frog  2687 TNFTLVCDVKANPLAKITWYKDGQPLEPDSHLAIVSGNTLYVEKAQVSDTGRYTCLASNIAGEDE 2751

  Fly  1431 IQYQVIAMKPPSAPQIIVQYASADSIRVSWDAPDDGGAPLQG-YTISYHTAGESWSITELLPENN 1494
            :.:.|....||:.|:                        |.| :|.|..:.|.|....:.:..||
 Frog  2752 LDFDVTIQVPPNFPK------------------------LSGLWTTSKSSTGSSNGEHKEVIINN 2792

  Fly  1495 AFTISGLKCGNQYIIKMSAHNMVGSGVASEEIN-------VWTKGKASQAPNANELIATNATCVN 1552
            .|:   |.|                     |.|       .|.|......|:....|.       
 Frog  2793 PFS---LYC---------------------ETNAVPPPTITWYKDDKLLTPSNRAFIL------- 2826

  Fly  1553 LKLSSWQNGGCSIHHFSIEHRPLGDIRWTVVTSDISNAEENRENLIFCDFLPAKWYQLRISATND 1617
                                 |.|.|      ..|:.|:|:......|            .|.|:
 Frog  2827 ---------------------PGGHI------LQIARAQEDDAGTYTC------------VAVNE 2852

  Fly  1618 AGKTTEHYHFSTTNIDGITIPPPSVFPSENDLMNNLINSTNPTSGDWFATLIVVVIITVSIITIA 1682
            ||:.:.||:..       .:.||:...|:.||..::.:..|.|     ..:...|.:|.|.....
 Frog  2853 AGRDSMHYNVR-------VLLPPAFEGSDEDLSKDITSLVNET-----LEMDCTVAVTGSPAPTI 2905

  Fly  1683 LTIKHRRTLCGPIAEG------YESRTLPGDYKEDHENRRNQQVYSASPVKTVDK---------- 1731
            ..:|...    ||.||      ...|||...|.:..:..|...|.. :|..:|.|          
 Frog  2906 SWLKDGH----PIQEGTRYHFLTNGRTLKILYAQLMDTGRYVCVVE-NPAGSVQKSFNLNIYVPP 2965

  Fly  1732 ---GNESEMYEISPYATFSVNGGRTGAPAKTPTRAVAAQTPLDYTMQFKTFGH----PEGENLNA 1789
               |:.||...:......|:....||.|.       .|.:.|..||...:..|    |.|..|. 
 Frog  2966 SVIGSNSENVTVVESNFISLTCEVTGFPP-------PAVSWLKDTMVLNSDSHLFIVPGGRTLQ- 3022

  Fly  1790 TAYPLLPSSGFGHVKSKSSWHKQRYYNTEDESTLSKSMTIVAGSQAGHSKKS 1841
                 :|.:....|...|                     .:|.:|||.:||:
 Frog  3023 -----IPQTRLSDVGEYS---------------------CIAINQAGEAKKT 3048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dscam3NP_996226.2 IG 56..133 CDD:214652 26/135 (19%)
Ig 56..125 CDD:143165 23/127 (18%)
I-set 246..337 CDD:254352 24/92 (26%)
Ig 264..334 CDD:143165 21/71 (30%)
I-set 345..433 CDD:254352 24/95 (25%)
Ig 358..431 CDD:143165 21/72 (29%)
Ig 456..533 CDD:143165 20/77 (26%)
IGc2 553..619 CDD:197706 19/65 (29%)
I-set 634..724 CDD:254352 25/101 (25%)
ig 645..712 CDD:278476 19/78 (24%)
IG_like 734..815 CDD:214653 24/88 (27%)
Ig 745..815 CDD:299845 23/77 (30%)
I-set 820..913 CDD:254352 20/94 (21%)
Ig 838..920 CDD:299845 21/87 (24%)
FN3 917..1033 CDD:238020 22/132 (17%)
FN3 1040..1142 CDD:238020 20/106 (19%)
fn3 1150..1237 CDD:278470 17/86 (20%)
FN3 1263..1345 CDD:238020 16/83 (19%)
Ig 1350..1436 CDD:299845 22/93 (24%)
IG_like 1358..1436 CDD:214653 19/77 (25%)
FN3 1441..1530 CDD:238020 15/96 (16%)
FN3 1542..1620 CDD:238020 11/77 (14%)
hmcn1XP_012816895.2 Ig strand A 2010..2015 CDD:409353 3/14 (21%)
I-set 2011..2099 CDD:400151 25/101 (25%)
Ig strand A' 2019..2025 CDD:409353 2/5 (40%)
Ig strand B 2026..2036 CDD:409353 0/9 (0%)
Ig strand C 2040..2046 CDD:409353 1/5 (20%)
Ig strand C' 2048..2050 CDD:409353 0/1 (0%)
Ig strand D 2057..2060 CDD:409353 0/2 (0%)
Ig strand E 2065..2071 CDD:409353 1/9 (11%)
Ig strand F 2077..2086 CDD:409353 6/8 (75%)
Ig strand G 2089..2101 CDD:409353 2/11 (18%)
Ig_3 2102..2177 CDD:404760 23/81 (28%)
Ig strand A 2102..2105 CDD:409353 1/2 (50%)
Ig strand A' 2111..2114 CDD:409353 0/2 (0%)
Ig strand B 2120..2127 CDD:409353 2/6 (33%)
Ig strand C 2133..2138 CDD:409353 2/11 (18%)
Ig strand C' 2141..2143 CDD:409353 1/1 (100%)
Ig strand D 2149..2153 CDD:409353 0/3 (0%)
Ig strand E 2155..2160 CDD:409353 2/4 (50%)
Ig strand F 2169..2177 CDD:409353 4/7 (57%)
Ig strand G 2180..2190 CDD:409353 1/9 (11%)
Ig 2194..2285 CDD:416386 20/95 (21%)
Ig strand A 2194..2197 CDD:409353 0/2 (0%)
Ig strand A' 2202..2207 CDD:409353 0/4 (0%)
Ig strand B 2213..2220 CDD:409353 2/6 (33%)
Ig strand C 2226..2231 CDD:409353 1/4 (25%)
Ig strand C' 2233..2235 CDD:409353 0/1 (0%)
Ig strand D 2243..2247 CDD:409353 0/3 (0%)
Ig strand E 2251..2257 CDD:409353 3/5 (60%)
Ig strand F 2264..2271 CDD:409353 2/6 (33%)
Ig strand G 2277..2285 CDD:409353 1/7 (14%)
Ig_3 2288..2366 CDD:404760 15/87 (17%)
Ig strand A' 2300..2304 CDD:409353 0/3 (0%)
Ig strand B 2308..2315 CDD:409353 1/6 (17%)
Ig strand C 2322..2327 CDD:409353 2/6 (33%)
Ig strand C' 2329..2332 CDD:409353 0/2 (0%)
Ig strand D 2337..2341 CDD:409353 1/3 (33%)
Ig strand E 2344..2351 CDD:409353 1/6 (17%)
Ig strand F 2358..2366 CDD:409353 1/7 (14%)
Ig strand B 2403..2407 CDD:409353 1/8 (13%)
Ig 2404..2473 CDD:416386 21/98 (21%)
Ig strand C 2416..2420 CDD:409353 2/16 (13%)
Ig strand E 2439..2443 CDD:409353 0/3 (0%)
Ig strand F 2453..2458 CDD:409353 0/4 (0%)
I-set 2477..2565 CDD:400151 24/107 (22%)
Ig strand B 2495..2499 CDD:409353 0/3 (0%)
Ig strand C 2508..2512 CDD:409353 1/3 (33%)
Ig strand E 2531..2535 CDD:409353 0/3 (0%)
Ig strand F 2545..2550 CDD:409353 1/6 (17%)
Ig 2579..2660 CDD:416386 19/96 (20%)
Ig strand A' 2579..2584 CDD:409353 1/4 (25%)
Ig strand B 2590..2597 CDD:409353 1/15 (7%)
Ig strand C 2603..2608 CDD:409353 1/4 (25%)
Ig strand C' 2610..2612 CDD:409353 1/1 (100%)
Ig strand D 2619..2622 CDD:409353 2/2 (100%)
Ig strand E 2626..2632 CDD:409353 1/7 (14%)
Ig strand F 2639..2646 CDD:409353 0/6 (0%)
Ig strand G 2652..2660 CDD:409353 1/11 (9%)
I-set 2673..2758 CDD:400151 21/84 (25%)
Ig strand B 2689..2693 CDD:409353 1/3 (33%)
Ig strand C 2702..2706 CDD:409353 0/3 (0%)
Ig strand E 2725..2728 CDD:409353 1/2 (50%)
Ig strand F 2738..2743 CDD:409353 3/4 (75%)
Ig strand B 2794..2798 CDD:409353 2/6 (33%)
Ig 2795..2857 CDD:416386 19/131 (15%)
Ig strand C 2807..2811 CDD:409353 0/3 (0%)
Ig strand E 2830..2834 CDD:409353 1/9 (11%)
Ig strand F 2844..2849 CDD:409353 1/16 (6%)
I-set 2878..2961 CDD:400151 19/92 (21%)
Ig strand A' 2886..2889 CDD:409353 2/7 (29%)
Ig strand C 2904..2909 CDD:409353 0/4 (0%)
Ig strand C' 2911..2913 CDD:409353 0/5 (0%)
Ig strand D 2919..2923 CDD:409353 0/3 (0%)
Ig strand E 2926..2932 CDD:409353 3/5 (60%)
Ig strand F 2940..2948 CDD:409353 2/8 (25%)
Ig_3 2964..3040 CDD:404760 19/109 (17%)
Ig strand A 2967..2970 CDD:409353 0/2 (0%)
Ig strand A' 2974..2977 CDD:409353 0/2 (0%)
Ig strand B 2983..2990 CDD:409353 1/6 (17%)
Ig strand C 2996..3001 CDD:409353 1/4 (25%)
Ig strand D 3011..3015 CDD:409353 1/3 (33%)
Ig strand E 3018..3024 CDD:409353 2/11 (18%)
Ig strand F 3032..3040 CDD:409353 2/28 (7%)
Ig strand G 3043..3053 CDD:409353 3/6 (50%)
Ig strand A 3056..3061 CDD:409353
Ig strand A' 3067..3073 CDD:409353
I-set 3070..3148 CDD:400151
Ig strand B 3076..3086 CDD:409353
Ig strand C 3090..3096 CDD:409353
Ig strand C' 3098..3100 CDD:409353
Ig strand D 3106..3109 CDD:409353
Ig strand E 3114..3120 CDD:409353
Ig strand F 3126..3135 CDD:409353
Ig strand G 3138..3150 CDD:409353
Ig 3169..3242 CDD:416386
Ig strand B 3170..3174 CDD:409353
Ig strand C 3183..3187 CDD:409353
Ig strand E 3208..3212 CDD:409353
Ig strand F 3222..3227 CDD:409353
Ig strand A 3245..3250 CDD:409353
Ig strand A' 3254..3260 CDD:409353
I-set 3259..3329 CDD:400151
Ig strand B 3263..3273 CDD:409353
Ig strand C 3277..3283 CDD:409353
Ig strand C' 3285..3287 CDD:409353
Ig strand D 3295..3298 CDD:409353
Ig strand E 3303..3309 CDD:409353
Ig strand F 3315..3324 CDD:409353
Ig strand G 3327..3339 CDD:409353
I-set 3341..3431 CDD:400151
Ig strand B 3361..3368 CDD:409353
Ig strand C 3374..3379 CDD:409353
Ig strand C' 3381..3383 CDD:409353
Ig strand D 3389..3393 CDD:409353
Ig strand E 3397..3402 CDD:409353
Ig strand F 3411..3417 CDD:409353
Ig 3444..3524 CDD:416386
Ig strand A' 3445..3448 CDD:409353
Ig strand B 3454..3461 CDD:409353
Ig strand C 3467..3472 CDD:409353
Ig strand C' 3474..3476 CDD:409353
Ig strand D 3481..3486 CDD:409353
Ig strand E 3489..3495 CDD:409353
Ig strand F 3503..3511 CDD:409353
Ig strand G 3514..3524 CDD:409353
Ig strand A 3527..3532 CDD:409353
Ig strand A' 3536..3542 CDD:409353
Ig 3539..3617 CDD:416386
Ig strand B 3545..3555 CDD:409353
Ig strand C 3559..3565 CDD:409353
Ig strand C' 3567..3569 CDD:409353
vWFA 43..199 CDD:238119
MD 295..418 CDD:214741
IGc2 446..507 CDD:197706
Ig strand B 449..452 CDD:409353
Ig strand C 461..465 CDD:409353
Ig strand E 483..487 CDD:409353
Ig strand F 497..502 CDD:409353
Ig strand G 511..514 CDD:409353
Ig 521..608 CDD:416386
Ig strand A' 529..532 CDD:409353
Ig strand B 538..545 CDD:409353
Ig strand C 551..556 CDD:409353
Ig strand C' 558..560 CDD:409353
Ig strand D 568..572 CDD:409353
Ig strand E 575..580 CDD:409353
Ig strand F 588..596 CDD:409353
Ig strand G 599..607 CDD:409353
I-set 613..691 CDD:400151
Ig strand A' 621..624 CDD:409353
Ig strand B 630..637 CDD:409353
Ig strand C 643..648 CDD:409353
Ig strand C' 650..652 CDD:409353
Ig strand D 658..663 CDD:409353
Ig strand E 665..669 CDD:409353
Ig strand F 678..686 CDD:409353
Ig strand G 689..700 CDD:409353
Ig_3 703..777 CDD:404760
Ig strand A' 709..714 CDD:409353
Ig strand B 718..725 CDD:409353
Ig strand C 733..737 CDD:409353
Ig strand D 749..752 CDD:409353
Ig strand E 756..761 CDD:409353
Ig strand F 769..777 CDD:409353
Ig strand G 783..790 CDD:409353
I-set 794..885 CDD:400151
Ig strand A 794..797 CDD:409353
Ig strand A' 802..805 CDD:409353
Ig strand B 811..818 CDD:409353
Ig strand C 824..835 CDD:409353
Ig strand C' 838..840 CDD:409353
Ig strand D 845..849 CDD:409353
Ig strand E 851..855 CDD:409353
Ig strand F 864..872 CDD:409353
Ig strand G 875..885 CDD:409353
Ig_3 891..965 CDD:404760
Ig strand A' 899..901 CDD:409353
Ig strand B 907..915 CDD:409353
Ig strand C 922..927 CDD:409353
Ig strand C' 929..932 CDD:409353
Ig strand D 937..941 CDD:409353
Ig strand E 944..950 CDD:409353
Ig strand F 957..965 CDD:409353
Ig strand G 968..972 CDD:409353
Ig strand G' 974..978 CDD:409353
PHA02785 991..1258 CDD:165149
Ig 1268..1355 CDD:416386
Ig strand A' 1272..1275 CDD:409353
Ig strand B 1284..1291 CDD:409353
Ig strand C 1297..1302 CDD:409353
Ig strand C' 1305..1307 CDD:409353
Ig strand D 1313..1319 CDD:409353
Ig strand E 1321..1325 CDD:409353
Ig strand F 1334..1342 CDD:409353
Ig strand G 1345..1355 CDD:409353
Ig 1366..1448 CDD:416386 15/65 (23%)
Ig strand B 1378..1382 CDD:409353 429/2002 (21%)
Ig strand C 1391..1395 CDD:409353 2/3 (67%)
Ig strand E 1413..1418 CDD:409353 1/4 (25%)
Ig strand F 1428..1433 CDD:409353 0/4 (0%)
Ig strand G 1442..1445 CDD:409353 0/2 (0%)
I-set 1457..1542 CDD:400151 15/103 (15%)
Ig strand A' 1462..1465 CDD:409353 0/2 (0%)
Ig strand B 1471..1478 CDD:409353 0/6 (0%)
Ig strand C 1484..1489 CDD:409353 1/6 (17%)
Ig strand C' 1491..1493 CDD:409353 0/7 (0%)
Ig strand D 1500..1504 CDD:409353 1/3 (33%)
Ig strand E 1507..1513 CDD:409353 3/14 (21%)
Ig strand F 1521..1529 CDD:409353 2/7 (29%)
Ig strand G 1532..1542 CDD:409353 0/9 (0%)
Ig 1565..1629 CDD:416386 18/72 (25%)
Ig strand B 1565..1569 CDD:409353 0/3 (0%)
Ig strand C 1578..1582 CDD:409353 0/3 (0%)
Ig strand E 1601..1605 CDD:409353 1/4 (25%)
Ig strand F 1615..1620 CDD:409353 1/4 (25%)
I-set 1649..1729 CDD:400151 25/95 (26%)
Ig strand B 1659..1666 CDD:409353 2/6 (33%)
Ig strand C 1672..1677 CDD:409353 2/6 (33%)
Ig strand D 1688..1691 CDD:409353 0/2 (0%)
Ig strand E 1695..1701 CDD:409353 2/5 (40%)
Ig strand F 1708..1715 CDD:409353 2/6 (33%)
Ig strand G 1721..1729 CDD:409353 1/13 (8%)
I-set 1741..1822 CDD:400151 24/96 (25%)
Ig strand A' 1743..1746 CDD:409353 0/2 (0%)
Ig strand B 1752..1759 CDD:409353 1/6 (17%)
Ig strand C 1765..1770 CDD:409353 1/4 (25%)
Ig strand C' 1772..1774 CDD:409353 1/1 (100%)
Ig strand D 1780..1784 CDD:409353 1/3 (33%)
Ig strand E 1787..1793 CDD:409353 2/5 (40%)
Ig strand F 1801..1809 CDD:409353 5/7 (71%)
Ig <1844..1914 CDD:416386 21/79 (27%)
Ig strand C 1856..1860 CDD:409353 0/3 (0%)
Ig strand C' 1863..1866 CDD:409353 0/2 (0%)
Ig strand D 1872..1876 CDD:409353 0/3 (0%)
Ig strand E 1880..1885 CDD:409353 0/4 (0%)
Ig strand F 1893..1901 CDD:409353 5/7 (71%)
Ig strand G 1904..1914 CDD:409353 2/9 (22%)
Ig 1937..2007 CDD:416386 23/73 (32%)
Ig strand B 1937..1941 CDD:409353 2/3 (67%)
Ig strand C 1950..1954 CDD:409353 0/3 (0%)
Ig strand E 1973..1977 CDD:409353 1/3 (33%)
Ig strand F 1987..1992 CDD:409353 2/4 (50%)
Ig strand D 3576..3579 CDD:409353
Ig strand E 3583..3589 CDD:409353
Ig strand F 3595..3604 CDD:409353
Ig strand G 3607..3617 CDD:409353
I-set 3630..3710 CDD:400151
Ig strand A' 3631..3634 CDD:409353
Ig strand B 3640..3647 CDD:409353
Ig strand C 3653..3658 CDD:409353
Ig strand C' 3660..3662 CDD:409353
Ig strand D 3668..3672 CDD:409353
Ig strand E 3675..3681 CDD:409353
Ig strand F 3689..3697 CDD:409353
Ig_3 3713..3788 CDD:404760
Ig strand A' 3722..3725 CDD:409353
Ig strand B 3731..3738 CDD:409353
Ig strand C 3744..3749 CDD:409353
Ig strand C' 3751..3753 CDD:409353
Ig strand D 3760..3764 CDD:409353
Ig strand E 3767..3772 CDD:409353
Ig strand F 3780..3788 CDD:409353
Ig strand G 3791..3801 CDD:409353
Ig_3 3804..3879 CDD:404760
Ig strand B 3823..3826 CDD:409353
Ig strand C 3835..3839 CDD:409353
Ig strand E 3860..3864 CDD:409353
Ig strand F 3874..3879 CDD:409353
Ig strand A' 3906..3909 CDD:409353
Ig 3908..3985 CDD:416386
Ig strand B 3915..3922 CDD:409353
Ig strand C 3928..3933 CDD:409353
Ig strand C' 3935..3937 CDD:409353
Ig strand D 3944..3948 CDD:409353
Ig strand E 3951..3956 CDD:409353
Ig strand F 3964..3972 CDD:409353
Ig strand G 3975..3985 CDD:409353
I-set 3989..4075 CDD:400151
Ig strand B 4006..4013 CDD:409353
Ig strand C 4019..4024 CDD:409353
Ig strand C' 4026..4028 CDD:409353
Ig strand D 4034..4038 CDD:409353
Ig strand E 4041..4046 CDD:409353
Ig strand F 4054..4062 CDD:409353
Ig strand G 4065..4075 CDD:409353
Ig_3 4078..4152 CDD:404760
Ig strand C 4109..4113 CDD:409353
Ig strand C' 4116..4119 CDD:409353
Ig strand D 4126..4129 CDD:409353
Ig strand E 4131..4136 CDD:409353
Ig strand F 4144..4152 CDD:409353
Ig strand G 4155..4165 CDD:409353
Ig strand A 4168..4171 CDD:409353
I-set 4169..4256 CDD:400151
Ig strand A' 4177..4180 CDD:409353
Ig strand B 4185..4193 CDD:409353
Ig strand C 4199..4203 CDD:409353
Ig strand C' 4206..4209 CDD:409353
Ig strand D 4215..4219 CDD:409353
Ig strand E 4222..4227 CDD:409353
Ig strand F 4235..4243 CDD:409353
Ig strand G 4246..4256 CDD:409353
Ig_3 4259..4333 CDD:404760
putative Ig strand A 4260..4266 CDD:409353
Ig strand B 4277..4281 CDD:409353
Ig strand C 4290..4295 CDD:409353
Ig strand E 4312..4316 CDD:409353
Ig strand F 4326..4331 CDD:409353
Ig strand G 4339..4342 CDD:409353
Ig 4358..4436 CDD:416386
Ig strand B 4368..4375 CDD:409353
Ig strand C 4381..4386 CDD:409353
Ig strand C' 4388..4390 CDD:409353
Ig strand D 4396..4400 CDD:409353
Ig strand E 4403..4408 CDD:409353
Ig strand F 4416..4424 CDD:409353
Ig strand G 4427..4436 CDD:409353
Ig 4443..4527 CDD:416386
Ig strand A' 4449..4452 CDD:409353
Ig strand B 4458..4465 CDD:409353
Ig strand C 4471..4476 CDD:409353
Ig strand C' 4478..4480 CDD:409353
Ig strand D 4486..4490 CDD:409353
Ig strand E 4493..4498 CDD:409353
Ig strand F 4506..4514 CDD:409353
Ig strand G 4517..4527 CDD:409353
TSP1 4534..4585 CDD:214559
TSP1 4590..4642 CDD:214559
TSP1 4647..4699 CDD:214559
TSP1 4704..4756 CDD:214559
TSP1 4761..4813 CDD:214559
TSP1 4818..4870 CDD:214559
nidG2 4869..5093 CDD:412205
cEGF 5128..5151 CDD:403760
EGF_CA 5148..5183 CDD:214542
EGF_CA 5193..5230 CDD:214542
EGF_CA 5231..5272 CDD:214542
EGF_CA 5273..5314 CDD:311536
EGF_CA 5316..5355 CDD:214542
EGF_CA 5356..>5391 CDD:214542
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 1.000 Domainoid score I11237
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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