DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cysu and Pxdn

DIOPT Version :9

Sequence 1:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster
Sequence 2:XP_006515268.1 Gene:Pxdn / 69675 MGIID:1916925 Length:1503 Species:Mus musculus


Alignment Length:778 Identity:249/778 - (32%)
Similarity:362/778 - (46%) Gaps:156/778 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 AINAAYLDARKRIHVAQPKSDWKPEEL---------------ATVGELLLDISIQLARTYGLSYE 121
            |||:    .|..:..::|:|   |.:|               |..||:       ..||..|..|
Mouse   663 AINS----TRTHLFDSRPRS---PNDLLALFRYPRDPYTVGQARAGEI-------FERTLQLIQE 713

  Fly   122 EIEKGLPTIDTSKTLIRE---VCPPFFAGVE-----------------CRPGKYRRFDGLCNNIE 166
            .::.|| .:|.:.|....   |.|.:.:.:.                 |...|||..||.|||::
Mouse   714 HVQHGL-MVDLNGTSYHYNDLVSPQYLSLIANLSGCTAHRRVNNCSDMCFHQKYRTHDGTCNNLQ 777

  Fly   167 HPTWGAANAPFQRLIGPLYSDGINAPR-----ISVTGRDLPFSRVVSRTM------HPDDGFHDH 220
            ||.|||:...|:||:..:|.:|.|.||     ....|..||..|:||.|:      .||:.|   
Mouse   778 HPMWGASLTAFERLLKAVYENGFNTPRGINSQRQYNGHVLPMPRLVSTTLIGTEVITPDEQF--- 839

  Fly   221 AGTVMVIAWGQFMDHDFTLTGTPLDPINRNDPEEC---CKRPLHLKHPYCNEIRIPDDDYFYRLF 282
              |.|::.||||:|||...|...|.....:|.:.|   |.     ..|.|..:.||.:|...| .
Mouse   840 --THMLMQWGQFLDHDLDSTVVALSQARFSDGQHCSSVCS-----NDPPCFSVMIPPNDPRVR-S 896

  Fly   283 NVKCIDFVRGFPSPRPGCKLGS--------RQQFNTLTGVIDANTVYGVKESFARKLR--TGYGG 337
            ..:|:.|||.  ||..|..:.|        |:|.|.||..|||:.|||..:..||.:|  ..:.|
Mouse   897 GARCMFFVRS--SPVCGSGMTSLLMNSVYPREQINQLTSYIDASNVYGSTDHEARSIRDLASHRG 959

  Fly   338 LMRMNPVFQEYGLKDLLPLKLDIPDEGCTRPNKS-MYCFEGGEIRVNEQLVLTCMHTLMAREHNR 401
            |:|.. :.|..| |.|||.....|.|.....|:| :.||..|:.|.||||.||.||||..|||||
Mouse   960 LLRQG-IVQRSG-KPLLPFATGPPTECMRDENESPIPCFLAGDHRANEQLGLTSMHTLWFREHNR 1022

  Fly   402 LATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEKFGLVLQKDGYWDGYDS 466
            :|..|.::|.|||.:|::.|.|:|..|.:||:|:..:||.:||:..|:..       |.:.|||.
Mouse  1023 IAAELLKLNPHWDGDTVYHETRKIVGAEIQHITYRHWLPKILGEVGMKML-------GEYRGYDP 1080

  Fly   467 TVNPGIIDSFAGAAFRFGHSLLPTAVERWSK-----------AHKFIASKRLSDLIRRPYDLYRA 520
            :||.||.::||.|||||||:|:...:.|..:           .||...|         |:.:...
Mouse  1081 SVNAGIFNAFATAAFRFGHTLINPLLYRLDENFEPIPQGHVPLHKAFFS---------PFRIVNE 1136

  Fly   521 GVLDEYFMGLMNQVAQAM---DDSITQEVTNHLFKKEGARFGMDLVSFNMQRGREFGIPGYMEFR 582
            |.:|....||.. ||..|   ...:..|:|..||.. .....:||.:.|:||||:.|||.|.::|
Mouse  1137 GGIDPLLRGLFG-VAGKMRIPSQLLNTELTERLFSM-AHTVALDLAAINIQRGRDHGIPPYHDYR 1199

  Fly   583 KFCGLPTSNTWDEMYGSMPNETVLR-----YGSIFEHPADIDLWSGGVSEKSLPGSMLGPTFACV 642
            .:|.|..:.|::::...:.:..:..     |||..    :|||:...:.|..:|||.||||..|:
Mouse  1200 VYCNLSAAYTFEDLKNEIKSPVIREKLQRLYGSTL----NIDLFPALMVEDLVPGSRLGPTLMCL 1260

  Fly   643 IATQMSYLRRGDRFWYELPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQ--IYPMVLPDHE 705
            ::||...||.|||.|||   .|..|:|.||.::::..|:|::|||:|.|..||  ::.:....|.
Mouse  1261 LSTQFRRLRDGDRLWYE---NPGVFSPAQLTQLKQTSLARILCDNSDNITRVQQDVFRVAEFPHG 1322

  Fly   706 INPRVPCKSGIIPSIDLTKWAD-------------FGGH--GVDPSLYNYINEIPDTLLNFRK 753
            .:   .|:.  ||.:||..|.|             |..|  |.....::|.::.|.....:||
Mouse  1323 YS---SCED--IPRVDLRVWQDCCEDCRTRGQFNAFSYHFRGRRSLEFSYEDDKPTKRARWRK 1380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 208/580 (36%)
peroxinectin_like 305..687 CDD:188655 147/403 (36%)
PxdnXP_006515268.1 leucine-rich repeat 94..112 CDD:275380
leucine-rich repeat 113..127 CDD:275378
LRR_8 115..171 CDD:338972
LRR_8 160..219 CDD:338972
leucine-rich repeat 161..184 CDD:275378
leucine-rich repeat 185..208 CDD:275378
leucine-rich repeat 209..221 CDD:275378
TPKR_C2 217..268 CDD:387596
I-set 271..358 CDD:369462
I-set 367..454 CDD:369462
Ig3_Peroxidasin 471..544 CDD:143222
Ig4_Peroxidasin 567..635 CDD:143223
peroxidasin_like 889..1328 CDD:188658 165/471 (35%)
VWC 1439..1494 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840087
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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