DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cysu and Ptgs2

DIOPT Version :9

Sequence 1:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_058928.3 Gene:Ptgs2 / 29527 RGDID:620349 Length:604 Species:Rattus norvegicus


Alignment Length:748 Identity:145/748 - (19%)
Similarity:241/748 - (32%) Gaps:252/748 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MILRILLLSLA-AVAHA---------------------QYH-------QFGEQLQTAHGSDCALL 36
            |:.|.:||..| |::||                     ||.       .:||...|........|
  Rat     1 MLFRAVLLCAALALSHAANPCCSNPCQNRGECMSIGFDQYKCDCTRTGFYGENCTTPEFLTRIKL 65

  Fly    37 LAGPGRSSVYDYNVNLFRGTLNPYNNGPGTCITYDAINAAYLDARKRIHVAQPKSDWKPEELATV 101
            |..|..::|: |.:..|:|..|..||.|   ...::|....|.:|..:..:.|            
  Rat    66 LLKPTPNTVH-YILTHFKGVWNIVNNIP---FLRNSIMRYVLTSRSHLIDSPP------------ 114

  Fly   102 GELLLDISIQLARTYGLSYEEIEKGLPTIDTSKTLIREVCPPFFAGVECRPGKYRRFDGLCNNIE 166
                         ||.:.|                                 .|:.::.. :|:.
  Rat   115 -------------TYNVHY---------------------------------GYKSWEAF-SNLS 132

  Fly   167 HPTWGAANAPFQRLIGPLYSDGINAPRISVTG-RDLPFSR-VVSRTMHPDDGFHDHAGTVMVIA- 228
            :         :.|.:.|: :|....| :.|.| ::||.|: |:.:.:...:...|..||.|:.| 
  Rat   133 Y---------YTRALPPV-ADDCPTP-MGVKGNKELPDSKEVLEKVLLRREFIPDPQGTNMMFAF 186

  Fly   229 WGQFMDHDFTLTGTPLDPINRNDPEECCKRPLHLKHPYCNEIRIPDDDYFYRLFNVKCIDFVRGF 293
            :.|...|.|..|.....|                                         .|.|| 
  Rat   187 FAQHFTHQFFKTDQKRGP-----------------------------------------GFTRG- 209

  Fly   294 PSPRPGCKLGSRQQFNTLTGVIDANTVYGVKESFARKLRTGYGGLMRMN--------PVFQEYGL 350
                    ||..         :|.|.|||.......|||....|.::..        |..::..:
  Rat   210 --------LGHG---------VDLNHVYGETLDRQHKLRLFQDGKLKYQVIGGEVYPPTVKDTQV 257

  Fly   351 KDLLP------LKLDIPDE--GCTRPNKSMYCFEGGEIRVNEQLVLTCMHTLMAREHNRLATALA 407
            ..:.|      |:..:..|  |.. |...||.                  |:..|||||:...|.
  Rat   258 DMIYPPHVPEHLRFAVGQEVFGLV-PGLMMYA------------------TIWLREHNRVCDILK 303

  Fly   408 QINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEKFG---LVLQKDGYWDGYDSTVN 469
            |.:..||||.|||.:|.|.|.....:...:::..|.|.....||.   |..|:..|.:...|..|
  Rat   304 QEHPEWDDERLFQTSRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQQFQYQNRIASEFN 368

  Fly   470 PGIIDSFAGAAFRFGHSLLPTAVERWSKAHKFIASKRLSDLIRRPYDLYRAGVLDEYFMGLMNQV 534
                      .....|.|||.......:.:.|   |:.         ||...:|.|:  ||.:.|
  Rat   369 ----------TLYHWHPLLPDTFNIEDQEYTF---KQF---------LYNNSILLEH--GLAHFV 409

  Fly   535 AQAMDDSITQEVTNHLFKKEGARFGMDLVS-FNMQRGREFGIPGYMEFRKFCGLPTSNTWDEMYG 598
                 :|.|:::...:.........:..|: .::.:.||.......|:||...|....:::|:.|
  Rat   410 -----ESFTRQIAGRVAGGRNVPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG 469

  Fly   599 SMPNETVLRYGSIFEHPADIDLWSGGVSEKSLPGSMLGPTFACVIATQMSYLRRG--------DR 655
            .  .|......:::.....::|:...:.||..|.::.|.|   ::.....:..:|        .:
  Rat   470 E--KEMAAELKALYHDIDAMELYPALLVEKPRPDAIFGET---MVELGAPFSLKGLMGNPICSPQ 529

  Fly   656 FWYELPNQPSSFTPE-QLQEIRKAKLSRLICDN 687
            :|     :||:|..| ..:.|..|.:..|||:|
  Rat   530 YW-----KPSTFGGEVGFRIINTASIQSLICNN 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 114/565 (20%)
peroxinectin_like 305..687 CDD:188655 86/410 (21%)
Ptgs2NP_058928.3 EGF 21..53 CDD:278437 3/31 (10%)
prostaglandin_endoperoxide_synthase 75..562 CDD:188648 128/674 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.