DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cysu and Ptgs1

DIOPT Version :9

Sequence 1:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_058739.4 Gene:Ptgs1 / 24693 RGDID:3439 Length:602 Species:Rattus norvegicus


Alignment Length:646 Identity:130/646 - (20%)
Similarity:213/646 - (32%) Gaps:238/646 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 WGAANAPF-----QRLIGPLYSDGINAPRISVTGRDLPFSRVVSRTMHPDDGFHDHAGTVMVIAW 229
            |...||.|     .||:..:.|:.|.:|....|.                   ||:      |:|
  Rat   102 WEFVNATFIREVLMRLVLTVRSNLIPSPPTYNTA-------------------HDY------ISW 141

  Fly   230 GQFMDHDF---TLTGTPLDPINRNDPEECCKRPLHLKHPYCNEIRIPDDDYF-YRLF-------- 282
            ..|.:..:   .|...|.|          |..|:..|    .:.::||.... .||.        
  Rat   142 ESFSNVSYYTRILPSVPKD----------CPTPMGTK----GKKQLPDIHLLAQRLLLRREFIPA 192

  Fly   283 ----NVKCIDFVRGFPSPRPGCKLGSRQQFNT-----------LTGVIDANTVYGVKESFARK-- 330
                ||....|.:.|          :.|.|.|           |...:|...:||  :|..|:  
  Rat   193 PQGTNVLFAFFAQHF----------THQFFKTSGKMGPGFTKALGHGVDLGHIYG--DSLERQYH 245

  Fly   331 LRTGYGGLMRMN--------PVFQEYGLKDLLPLKLDIPDEGCTRPNKSMYCFEGGEIRVNEQLV 387
            ||....|.::..        |..::..:  |:.....:|      |.|.|        .|.:::.
  Rat   246 LRLFKDGKLKYQVLDGEVYPPSVEQASV--LMRYPPGVP------PEKQM--------AVGQEVF 294

  Fly   388 -----LTCMHTLMAREHNRLATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEV 447
                 |....|:..|||||:...|.:.:..||||.|||..|.|.|.....:...|::..|.|..:
  Rat   295 GLLPGLMLFSTIWLREHNRVCDLLKEEHPTWDDEQLFQTTRLILIGETIKIIIEEYVQHLSGYFL 359

  Fly   448 MEKFGLVLQKDGYWDGYDSTVNPGIIDSFAGAAFRF-------------GHSLLPTAVERWSKAH 499
            ..||                 :|.::   ..|.|::             .|.|:|.:.:..|:.:
  Rat   360 QLKF-----------------DPELL---FRAQFQYRNRIALEFNHLYHWHPLMPDSFQVGSQEY 404

  Fly   500 KFIASKRLSDLIRRPYDLYRAGVLDEYFMGLMNQVAQAMDDSITQE-----------------VT 547
            .:            ...|:...:|.:|.:       :|:.|:.:::                 |.
  Rat   405 SY------------EQFLFNTSMLVDYGV-------EALVDAFSRQRAGRIGGGRNFDYHVLHVA 450

  Fly   548 NHLFKKEGARFGMDLVSFNMQRGREFGIPGYMEFRKFCG-LPTSNTWDEMYGSMPNETVLRYGSI 611
            ..:.|:...   |.|.|||..|.| ||:..|..|::|.| ...:...:|:||             
  Rat   451 EDVIKESRE---MRLQSFNEYRKR-FGLKPYTSFQEFTGEKEMAAELEELYG------------- 498

  Fly   612 FEHPADID---LWSGGVSEKSLPGSMLGPTFACVIATQMSYLRRG--------DRFWYELPNQPS 665
                 |||   .:.|.:.||..|.|:.|.:   :|.....:..:|        ..:|     :||
  Rat   499 -----DIDALEFYPGLMLEKCQPNSLFGES---MIEMGAPFSLKGLLGNPICSPEYW-----KPS 550

  Fly   666 SFTPE-QLQEIRKAKLSRLICDNTDLIDTVQIYPMVLPDHEINPRVPCKSGII---PSIDL 722
            :|..: ....:..|.|.:|:|.||   .|.......:||:      |...|.:   ||.:|
  Rat   551 TFGGDVGFNIVNTASLKKLVCLNT---KTCPYVSFRVPDY------PGDDGSVFVRPSTEL 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 122/611 (20%)
peroxinectin_like 305..687 CDD:188655 91/450 (20%)
Ptgs1NP_058739.4 EGF_CA 35..72 CDD:238011
prostaglandin_endoperoxide_synthase 92..578 CDD:188648 123/614 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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