DRSC/TRiP Functional Genomics Resources

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Protein Alignment cysu and skpo-1

DIOPT Version :9

Sequence 1:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_495768.1 Gene:skpo-1 / 174340 WormBaseID:WBGene00009897 Length:655 Species:Caenorhabditis elegans


Alignment Length:604 Identity:182/604 - (30%)
Similarity:279/604 - (46%) Gaps:110/604 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 ECRPGKYRRFDGLCNNIEHPTWGAANAPFQRLIGPLYSDGINAPRISVTGRDLPFSRVVS-RTMH 212
            :|...|||..||.|||:::|..|||...|.||:...|.||.|. .:|.:.|:.|..|.|| ..:.
 Worm   137 QCFHKKYRSMDGTCNNLQNPVKGAAFTAFTRLMPAAYDDGFNT-LVSASRRNRPNPREVSVFLLS 200

  Fly   213 PDDGFHDHAGTVMVIAWGQFMDHDFTLTGTPLDPINRNDPEECCKRPLHLKHPYCNEIRIPDDDY 277
            .:.....|..::::: :|||:.||.|          .|..:..|  ......|.|..|..|..|.
 Worm   201 SERSLPGHVNSLLML-FGQFVSHDIT----------SNAAQNFC--GCQNSGPMCASIFAPPSDR 252

  Fly   278 FYRLFNVKCIDFVRGFPSPRPGCKLGS----RQQFNTLTGVIDANTVYGVKESFARKLRTGYGGL 338
            ..|     ||.|.|.||.    |..|.    |:|.|..|..|||:.:||.:...||.||  :..:
 Worm   253 SRR-----CIPFTRSFPI----CGTGQFGRVREQLNMNTAAIDASLIYGSEAITARSLR--FAAM 306

  Fly   339 MRMNPVFQEYGLKDLLPLKLDIPDEGCTRPNKSMYCFEGGEIRVNEQLVLTCMHTLMAREHNRLA 403
            :|.:.:...     :.|            ||.:......|:.|....:.|..:||...|.||.:|
 Worm   307 LRTSMIGGR-----MFP------------PNTNPGSLTAGDGRAILFVGLAALHTSFLRLHNNVA 354

  Fly   404 TALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLG---KEVMEKFGLVLQKDGYWDGYD 465
            ..|..:|:||:.:.:|||:|:|...|||.:|:.||:|.|:|   |.::          |.::||:
 Worm   355 ARLQNMNRHWNADRIFQESRKIVGGIVQVITYQEFVPELIGDASKTIL----------GAYNGYN 409

  Fly   466 STVNPGIIDSFAGAAFRFGHSLL----PTAVERWSKAHKFIASKRLSDLIRRPYDLYRAGV---- 522
            ..|..|:::.||..|:|. |.::    |....::.:.:::    |..|           ||    
 Worm   410 PNVEIGVLNEFAAGAYRL-HGMIQETYPLVNSQFQEVNRY----RFID-----------GVNNIN 458

  Fly   523 -----LDEYFMGLMNQVAQAMDDSITQEVTNHLFKKEGARFGMDLVSFNMQRGREFGIPGYMEFR 582
                 :|..:.|:|. |.......:|..||..||   |.  .:|:.:.|:||||:.|:..|.::|
 Worm   459 HVLNNIDAIYRGMMT-VPVRSPQRLTTSVTERLF---GG--SVDMAAVNIQRGRDHGLRSYNDYR 517

  Fly   583 KFCGL---PTSNTWDEMYGSMPNETV-LRYGSIFEHPADIDLWSGGVSEKSLPGSMLGPTFACVI 643
            :||.|   .:.|.|.|    :|:|.| .|.|.::..|.|:|.:.||:.|:...||:||.||||||
 Worm   518 RFCNLRPITSFNDWPE----VPDENVRQRIGQLYRTPDDLDFYVGGILEQPAAGSLLGATFACVI 578

  Fly   644 ATQMSYLRRGDRFWYELPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQIYPMVLPDHEINP 708
            ..|...||.||||:||   .|..||..||.|:::..||.::|...|  :.|::..........:.
 Worm   579 GKQFERLRDGDRFYYE---NPGVFTSPQLAELKRTTLSWVLCQTGD--NMVRVGRRAFDIENGSR 638

  Fly   709 RVPCKSGIIPSIDLTKWAD 727
            .|||.|  |..::|..|.:
 Worm   639 AVPCSS--ITGLNLEAWRE 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 172/561 (31%)
peroxinectin_like 305..687 CDD:188655 124/401 (31%)
skpo-1NP_495768.1 ShKT 22..56 CDD:214586
An_peroxidase 143..623 CDD:281139 172/562 (31%)
peroxinectin_like 275..619 CDD:188655 124/401 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2408
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 279 1.000 Inparanoid score I1765
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG49305
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.880

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