DRSC/TRiP Functional Genomics Resources

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Protein Alignment cysu and skpo-3

DIOPT Version :9

Sequence 1:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_495511.1 Gene:skpo-3 / 174191 WormBaseID:WBGene00017968 Length:1000 Species:Caenorhabditis elegans


Alignment Length:641 Identity:201/641 - (31%)
Similarity:300/641 - (46%) Gaps:111/641 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TIDTSKTL---IREVCPPFFAGVECRP-----GKYRRFDGLCNNIE-HPTWGAANAPFQRLIGPL 184
            |:|..:.:   ....|.|.....:|..     ..:|..||.|||:: .|..||:..|:.||:..:
 Worm   430 TVDLDQVIRSNTANACTPRLDEADCEANICYNAMFRTLDGTCNNMKGEPLRGASYRPYTRLLPTI 494

  Fly   185 YSDGINAPRISVTGRDLPFSRVVSRTM--------HPDDGFHDHAGTVMVIAWGQFMDHDFTLTG 241
            |.:.::.|..|:.....|..|.::|.:        .||       ...:::.:|||:.||  :..
 Worm   495 YDNEVSEPVGSLFTDARPSPREITRRLTSSQASVESPD-------YNALIMQFGQFISHD--MAK 550

  Fly   242 TPLDPINR-NDPEECCKRPLHLKHPYCNEIRIPDDDYFYRLFNVKCIDFVRGFPSPRPGCKLGSR 305
            |.|.|.:: |..:....|        |..:.|..||........:||...|..|....| .|..|
 Worm   551 TTLVPSSKCNVCQNITSR--------CMSVPITFDDSNANFRQAQCIRVSRSSPICGSG-NLKPR 606

  Fly   306 QQFNTLTGVIDANTVYGVKESFARKLRTGYGGLMRMNPVFQEYGLKDLLPLKLDIPDEG-CTRPN 369
            ||.|..||.|||:.:||.....::|.|.|..|.::: |:|..   |..||.     |:. |....
 Worm   607 QQLNENTGYIDASPIYGSSVHDSKKFRDGNSGFLKL-PMFNG---KAFLPF-----DQNKCRNRG 662

  Fly   370 KSMYCFEGGEIRVNEQLVLTCMHTLMAREHNRLATALAQINKHWDDETLFQEARRINIAIVQHVT 434
            :....|..|:.|||..:.|:..||:...|||||.||..::|.|||.|.|:||||::..|.||.:.
 Worm   663 QCSVIFTAGDSRVNLFVGLSAWHTIFTEEHNRLVTAFKRLNPHWDGERLYQEARKMIGAQVQAIV 727

  Fly   435 FNEFLPILLGKEVMEKFGLVLQKDGYWDGYDSTVNPGIIDSFAGAAFRFGHSLLPTAVERWSKAH 499
            :.|:||.:||    ..|..|:   |.:.||||.|:..:.:.|..|||||||.::....:|...:.
 Worm   728 YREWLPKVLG----ASFATVV---GDYRGYDSDVDSTVANEFTSAAFRFGHGMIQEFYQRLDNSF 785

  Fly   500 KFIASKRL--------SDLIRRPYDLYRAGVLDEYFMGLMNQVAQAMDDSITQEVTNHLFKKEGA 556
            :.|:...|        ||:      |...|.:|....|:.:|..: ....:|..||.::|.    
 Worm   786 RNISFGALPFQKGTLHSDV------LVNEGGVDPLIRGMFSQNVK-RPQRVTTTVTENMFG---- 839

  Fly   557 RFGMDLVSFNMQRGREFGIPGYMEFRKFCGLPTSNTWDEMYGSMPNETVLR------YGSIFEHP 615
              ..||.:.|:||||:.|.|.|:::|:.||:.|:..::.:...:.| |..|      |||:.:  
 Worm   840 --STDLSTINIQRGRDHGHPAYVKYRELCGMGTAFNFEHLSREILN-TGTRNKLQEIYGSVDK-- 899

  Fly   616 ADIDLWSGGVSEKSLPGSMLGPTFACVIATQMSYLRRGDRFWYELPNQPSSFTPEQLQEIRKAKL 680
              ||||.|.:.|..:...::|||.||:|..|....|.||||:||   .|..|:..||.||||:.|
 Worm   900 --IDLWVGALLEDPIIRGLVGPTVACIIGPQFKRTRDGDRFYYE---NPGVFSRRQLVEIRKSSL 959

  Fly   681 SRLICDNTDLIDTVQIYPMVLPDHEINPR--------VPCKSGIIPSIDLTKWADF 728
            ||:|||||:.|.|:             ||        |||..  |||:||.:|.||
 Worm   960 SRIICDNTNTISTI-------------PREAFRVGHMVPCSQ--IPSMDLNQWRDF 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 181/561 (32%)
peroxinectin_like 305..687 CDD:188655 138/396 (35%)
skpo-3NP_495511.1 ShKT 41..75 CDD:214586
An_peroxidase 464..978 CDD:376988 185/581 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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