DRSC/TRiP Functional Genomics Resources

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Protein Alignment cysu and skpo-2

DIOPT Version :10

Sequence 1:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster
Sequence 2:NP_494540.1 Gene:skpo-2 / 173686 WormBaseID:WBGene00015841 Length:729 Species:Caenorhabditis elegans


Alignment Length:630 Identity:185/630 - (29%)
Similarity:279/630 - (44%) Gaps:101/630 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 DTS--KTL-IREV--------CPPFFAGVECRPG-----KYRRFDGLCNNIEHPTWGAANAPFQR 179
            |||  ||| ||:|        |.|......|...     :||.|||.|||::.|..|:|.....|
 Worm   164 DTSIRKTLSIRDVRDSNANFNCAPTQETPNCNRNLCYHLRYRSFDGTCNNLKKPMIGSAFTALMR 228

  Fly   180 LIGPLYSDGINAPRISVTGRDLPFSRVVSRTMHPDDGFHDHAGTVMVIAWGQFMDHDFTLTGTPL 244
            |..|:|.:|:|||..|.. |..|.:|..||.:........|....:::.||||:.||.:.|    
 Worm   229 LKNPMYDNGLNAPTSSFL-RSRPSARDASRLLLSSSTQIQHHSNALLMQWGQFIAHDLSKT---- 288

  Fly   245 DPINRNDPEECCKRPLHLKHPYCNEIRIPDDDYFYRLFNVKCIDFVRGFPSPRPGCKLG---SRQ 306
            ..:|..:...|..     ....|..:.:...|..:..|  .|:...|.    .|.|..|   .|:
 Worm   289 TMLNNQECAACTS-----NKGRCTSVFLSRSDPTFGRF--MCLPVARS----TPVCGTGVSNFRE 342

  Fly   307 QFNTLTGVIDANTVYGVKESFARKLRTGYGGLMRMNPVFQEYGLKDLLPLKLDIPDEGCTRPNKS 371
            |||..|..||.:.:||..:......|.|         .|          ||..:.:.....|...
 Worm   343 QFNENTAFIDGSMIYGSSDRDQFLFRQG---------AF----------LKTKLINNRVFPPVDK 388

  Fly   372 MYCFEGGEIRVNEQLVLTCMHTLMAREHNRLATALAQINKHWDDETLFQEARRINIAIVQHVTFN 436
            ......|:.|.|..:.|..:|.|..|:|||:|..|.::|.|||.|.:|.|:|:|..|::|.:||.
 Worm   389 NNNVVAGDDRANIFVGLASLHVLYLRQHNRIAATLQRVNPHWDQERVFHESRKIVGAMIQRITFT 453

  Fly   437 EFLPILLGKEVMEKFGLVLQKDGYWDGYDSTVNPGIIDSFAGAAFRFGHSLLPTAVERWSKAHKF 501
            |:||.:||....|:.|.       :.|||..::|.:.:.|...||||||.::.......::..:.
 Worm   454 EYLPKVLGVAFEERIGA-------YPGYDPNIDPSVANEFTSCAFRFGHGMIQEFYPFLNEKFQH 511

  Fly   502 IASKRLSDLIRRPYDLYRAGVLDEYFMGLMNQVAQAMDDSITQEVTNHLFKKEGARFGMDLVSFN 566
            :.....:|.:.:...:...|: |....|||...|: |...:|..||..:|...      ||.|.|
 Worm   512 VGGIPFNDGMFKSTHILNNGI-DPLIRGLMTLPAK-MPQRLTPAVTERIFGNS------DLGSIN 568

  Fly   567 MQRGREFGIPGYMEFRKFCGLPTSNTWDEMYGSMPNETVL-RYGSIFEHPADIDLWSGGVSEKSL 630
            :||||:.|:|.|..:|||||||....::.:...:.|:.|: ....:::|...||::.|.:.|..:
 Worm   569 IQRGRDHGVPPYTVWRKFCGLPEVKDFEGLKQVISNQVVIDNLKVVYKHVDAIDMYVGSLLEDPV 633

  Fly   631 PGSMLGPTFACVIATQMSYLRRGDRFWYELPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQ 695
            ..:::|||.:|:|..|....|.|||.|||   ....|:||||.:|:|..:||::|      |..:
 Worm   634 KDALVGPTLSCIIGEQFKRTRNGDRLWYE---NSKVFSPEQLLQIKKITMSRVLC------DAGE 689

  Fly   696 IYPMVLPDHEINPR-------------VPCKSGIIPSIDLTKWAD 727
            .:|||       ||             |.|..  ||.:|...|.:
 Worm   690 HFPMV-------PRKAFSVFKPTAHNLVKCDE--IPDLDYNAWKE 725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cysuNP_650627.1 An_peroxidase 155..699 CDD:460804 162/547 (30%)
skpo-2NP_494540.1 ShKT 61..95 CDD:214586
ShKT 101..135 CDD:214586
An_peroxidase 204..699 CDD:460804 167/560 (30%)
Blue background indicates that the domain is not in the aligned region.

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