DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cysu and duox2

DIOPT Version :9

Sequence 1:NP_650627.1 Gene:cysu / 42100 FlyBaseID:FBgn0038511 Length:753 Species:Drosophila melanogaster
Sequence 2:XP_017947900.2 Gene:duox2 / 100486050 XenbaseID:XB-GENE-6047411 Length:1517 Species:Xenopus tropicalis


Alignment Length:616 Identity:156/616 - (25%)
Similarity:254/616 - (41%) Gaps:114/616 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 RRFDGLCNNIEHPTWGAANAPFQRLIGPLYSDGI-NAPRISVTGRDLPFSRVVSRTM-HPDDGFH 218
            :|:||..||:.:.:.|:..:...|.|...|:||: ..|:    ..:||..|.:|..: ....|..
 Frog    27 QRYDGWYNNLAYHSTGSPGSKLLRHIPAFYTDGVYQVPK----EPELPNPRSISNVVTKGKSGLP 87

  Fly   219 DHAG-TVMVIAWGQFMDHDFTLTGTPLDPINRNDPEECCKRPLHLKHPYCNEIRIPDDDYFYRLF 282
            .... |||.|::|..:..:...||.|..|..                 :.| |.||..|..:...
 Frog    88 SSRNLTVMAISFGYHVLSEVVYTGKPACPAE-----------------FLN-IEIPKGDLVFDRT 134

  Fly   283 NVK--CIDFVRG--FP----SPRPGCKLGSRQQFNTLTGVIDANTVYGVKESFARKLRTGYGGLM 339
            |..  .|.|.|.  :|    ||.     ..|...|:::..||.:::||...|:...||...||.:
 Frog   135 NTSKVVIPFQRSKWYPDTGRSPN-----NPRDHVNSVSAWIDGSSIYGSSHSWCDALRNFSGGKL 194

  Fly   340 RMNP--VFQEYGLKDLLPLKLDIPDEGCTRPNKSMYCFEGGEIRVNEQLVLTCMHTLMAREHNRL 402
            ...|  ....:...||...|:..|..|.| .|..:|.|  |..|.||...|..:..|..|.||..
 Frog   195 ASGPDEGVPRFAKSDLPMWKVPNPSTGET-GNNGLYAF--GNARANESPFLQSLGILWFRYHNYK 256

  Fly   403 ATALAQINKHWDDETLFQEARRINIAIVQHVTFNEFLPILLGKEVMEKFGLVLQKDGYWDGYDST 467
            |...|:.|..|.||.|||.||:..||:.|::.|.|:||..|.:.|..           :.||...
 Frog   257 AQEFAKENPEWSDEVLFQHARKWVIAVYQNIVFYEWLPAFLSRNVTA-----------YKGYQQH 310

  Fly   468 VNPGIIDSFAGAAFRFGHSLLPTAVERWSKAHKF----------IASKRLSDLI--RRPYDLYRA 520
            |:|.|...|.....:..::::|:.:...:|...|          ..:.||.:..  |...:|..:
 Frog   311 VDPSISPVFTVQLSQMIYTMMPSGIYMRNKDCNFQNVSGSNGSVWPALRLCNNYWNRENSNLKNS 375

  Fly   521 GVLDEYFMGLMNQVAQAMDDSITQEVTNHLFKK-EGARFGMDLVSFNMQRGREFGIPGYMEFRKF 584
            ...||..||:.:|:|:..|:.:..::|::.:.: :.:|  .||.:.::...|:.|:|.|.:..::
 Frog   376 SSTDEILMGMASQIAEKEDNILVNDLTDYCYGQIKYSR--TDLFAASILHARDLGLPNYNKVCEY 438

  Fly   585 CGLPTSNTWDEMYGSMPNETVLRYGSIFEHPADIDLWSGGVSEK--SLPG---SMLGPT---FAC 641
            ...|....|::|   ...|...:..|::          |..:||  .:||   .|.|.:   |:.
 Frog   439 YQCPLLENWEKM---TDKELGKKLASLY----------GNDTEKLEFIPGLLAEMAGNSINFFSD 490

  Fly   642 VIATQMSYLRRGDRFWYE-LPNQPSSFTPEQLQEIRKAKLSRLICDNTDLIDTVQ--IY------ 697
            ::..|...||.|||||:| :.|  ..|:.:.:..||..||..::...||..||:|  ::      
 Frog   491 IVLEQFYRLRDGDRFWFENVKN--GLFSKKDIDNIRNIKLQNVLVAVTDAGDTIQQNVFFLKEDD 553

  Fly   698 ----PMVLPDHEINPRVP---------CKSG 715
                |..|...|:...||         |.:|
 Frog   554 PCPQPKQLQSEELEECVPFTVTDYFEGCAAG 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cysuNP_650627.1 An_peroxidase 155..692 CDD:281139 146/570 (26%)
peroxinectin_like 305..687 CDD:188655 106/405 (26%)
duox2XP_017947900.2 dual_peroxidase_like 29..581 CDD:188652 153/609 (25%)
FRQ1 726..918 CDD:227455
PLN02292 1056..>1376 CDD:215165
NOX_Duox_like_FAD_NADP 1244..1517 CDD:99783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.