DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and bace1

DIOPT Version :9

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001072485.1 Gene:bace1 / 779940 XenbaseID:XB-GENE-5787150 Length:502 Species:Xenopus tropicalis


Alignment Length:415 Identity:103/415 - (24%)
Similarity:173/415 - (41%) Gaps:67/415 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GQL-IRIPMQFQASFMASRRQHRAGRSSLLAKYNVVGGQEVTSRNGGATETLDNRLNLEYAGPIS 86
            ||: |::|:: ......|...:||.||:       ..|.|:.:......:.|..:....|...:.
 Frog    25 GQVAIKLPLK-NCPGTCSPMAYRAKRSA-------EKGMELDTNFLDMIDNLRGKSGQGYYVEMR 81

  Fly    87 IGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRYNASASSTFVPDGRRFSIAYGTGSLSG 151
            :|:|.|..|:|.||||:|..|.:|   |......::||.:   |.|:....|...:.|..|...|
 Frog    82 VGTPPQTLNILVDTGSSNFAVGAA---PHPFLKRYYHRQH---SRTYRDVRRGVYVPYTQGKWEG 140

  Fly   152 RLAQDTVAI--GQLVVQNQTFGMATHEPGPTFVD-TNFAGIVGLGFRPIA--ELGIKPLFESMCD 211
            .|..|.|.|  |..|.........| :....|:: :|:.||:||.:..||  :..::|.|:|:..
 Frog   141 ELGTDLVTIPHGPNVTVTANIAAIT-DSDKFFINGSNWEGILGLAYAEIARPDDTLEPFFDSLVK 204

  Fly   212 QQLVDECVFSFYLKRNG--------SERKGGELLFGGVDKTKFSGSLTYVPLTHAGYWQFPLDVI 268
            |..|.. :||..|...|        |...||.::.||:|.:.:.||:.|.|:....|::..:..|
 Frog   205 QTRVPN-IFSLQLCGTGFHFNESDTSASVGGSMVIGGIDPSLYIGSIWYTPIRKEWYYEVIIVKI 268

  Fly   269 EVAGTRINQN------RQAIADTGTSLLAAPPREY-LIINSLLGGLPTSN-------NEYLLNCS 319
            |:.|..::.:      .::|.|:||:.|..|.|.: ..:.|:.....|..       .|.|: |.
 Frog   269 EINGQDLHMDCKEYNYDKSIVDSGTTNLRLPKRVFDAAVKSIKAASSTEKFPDGFWLGEQLV-CW 332

  Fly   320 EIDSLPEIVF---------IIGGQRFG--------LQPRDYVMSATNDDGSSICLSAFTLMDAEF 367
            :..:.|..:|         .:..|.|.        |:|.:.:.:|..|     |...........
 Frog   333 QEGTTPWHIFPVISLYLMGEVANQSFKITILPQQYLRPVEDIATAQED-----CYKFAVSQSTTG 392

  Fly   368 WILGDVFIGRYYTAFDAGQRRIGFA 392
            .::|.|.:..:|..||...:|||||
 Frog   393 TVMGAVIMEGFYVVFDRANKRIGFA 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 pepsin_retropepsin_like 71..392 CDD:299705 90/364 (25%)
Asp 80..394 CDD:278455 91/357 (25%)
bace1NP_001072485.1 beta_secretase_like 73..438 CDD:133140 91/359 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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