DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and Pga3

DIOPT Version :10

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_068521.1 Gene:Pga3 / 60372 RGDID:621573 Length:387 Species:Rattus norvegicus


Alignment Length:402 Identity:157/402 - (39%)
Similarity:219/402 - (54%) Gaps:31/402 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WLSLWILCLF-WAKCQGQLIRIPMQFQASFMASRRQHRAGRSSLLAKY-----NVVGGQEVTSRN 66
            |  ||:|.|. .::|   |::||:....|...:.|:... ....|.||     :|:..|.   ||
  Rat     3 W--LWVLGLVALSEC---LVKIPLMKIKSMRENLRESHM-LKDYLEKYPRSRAHVLLEQR---RN 58

  Fly    67 GGAT-ETLDNRLNLEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRYNASAS 130
            ...| |.:.|.|:|.|.|.||||:|.|.|.::.||||::|||||..||  |.||.||..:|...|
  Rat    59 PSVTYEPMRNYLDLVYIGTISIGTPPQEFKVVLDTGSSDLWVPSIYCS--SPACAHHKVFNPLQS 121

  Fly   131 STFVPDGRRFSIAYGTGSLSGRLAQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGIVGLGFR 195
            |||:..||..::|||:|.:||.||.|||.||.|.|..|.||::..|||.......|.||:|||:.
  Rat   122 STFLVSGRPVNVAYGSGEMSGFLAYDTVKIGDLTVVAQAFGLSLEEPGRFMEHAVFDGILGLGYP 186

  Fly   196 PIAELGIKPLFESMCDQQLVDECVFSFYLKRNGSERKGGELLFGGVDKTKFSGSLTYVPLTHAGY 260
            .:...|:.|:|:::..|.|:.:.:|:|||  :..:.||..|:.||||.:.:.|.|.:||::...|
  Rat   187 NLGLQGVTPVFDNLWIQGLIPQNLFAFYL--SSKDEKGSVLMLGGVDPSYYHGELHWVPVSKPSY 249

  Fly   261 WQFPLDVIEVAGTRI--NQNRQAIADTGTSLLAAPPREYLIINSLLGGLPTSNNEYLLNCSEIDS 323
            ||..:|.|.:.|..|  :...|.|.||||||:..|....|.|.:|:|...:.:.||.|.|..|::
  Rat   250 WQLAVDSISMNGEIIACDGGCQGIMDTGTSLVTGPRSSILNIQNLIGAKASGDGEYFLKCDTINT 314

  Fly   324 LPEIVFIIGGQRFGLQPRDYVMSATNDDGSSICLSAF-----TLMDAEFWILGDVFIGRYYTAFD 383
            ||:|||.|....:.:....|:    ..|.|..|.|.|     ...|.|.|:|||||:..|:|.||
  Rat   315 LPDIVFTIDSVTYPVPASAYI----RKDHSHNCRSNFEESTDDPSDPELWVLGDVFLRLYFTVFD 375

  Fly   384 AGQRRIGFAPAA 395
            ....|||.|.||
  Rat   376 RANNRIGLASAA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 Asp 80..394 CDD:394983 132/320 (41%)
Pga3NP_068521.1 A1_Propeptide 18..44 CDD:462326 5/26 (19%)
pepsin_retropepsin_like 64..385 CDD:472175 135/328 (41%)

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