DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and Cym

DIOPT Version :10

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_064476.2 Gene:Cym / 56825 RGDID:708486 Length:379 Species:Rattus norvegicus


Alignment Length:409 Identity:148/409 - (36%)
Similarity:219/409 - (53%) Gaps:46/409 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHCLISLWLSLWILCLFWAKCQGQLI-RIPMQFQASFMASRRQHRAGRSSLLAKYNVVGGQEVTS 64
            |.|.:   |.|.:|.:    .|..:: |||:....|...:.::     ..||..:......|.:.
  Rat     1 MRCFV---LLLAVLAI----AQSHVVTRIPLHKGKSLRNTLKE-----QGLLEDFLRRHQYEFSE 53

  Fly    65 RNGG----ATETLDNRLNLEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRY 125
            :|..    |:|.|.|.|:.||.|.|.:|:|.|.|.::|||||:.|||||..||.|  .|.:|:|:
  Rat    54 KNSNIGVVASEPLTNYLDSEYFGLIYVGTPPQEFKVVFDTGSSELWVPSVYCSSK--VCRNHNRF 116

  Fly   126 NASASSTFVPDGRRFSIAYGTGSLSGRLAQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGIV 190
            :.|.|.||....:...:.|||||:.|.||.|||.:..:||.:||.|::|.|||..|..:.|.||:
  Rat   117 DPSKSFTFQNLSKPLFVQYGTGSVEGFLAYDTVTVSDIVVPHQTVGLSTEEPGDIFTYSPFDGIL 181

  Fly   191 GLGFRPIAELGIKPLFESMCDQQLVDECVFSFYLKRNGSERKGGELLFGGVDKTKFSGSLTYVPL 255
            ||.:...|.....|:|::|.::.||.:.:||.|:.||.   :|..|..|.:|::.|.|||.:||:
  Rat   182 GLAYPTFASKYSVPIFDNMMNRHLVAQDLFSVYMSRND---QGSMLTLGAIDQSYFIGSLHWVPV 243

  Fly   256 THAGYWQFPLDVIEVAGTRINQNRQAIA---------DTGTSLLAAPPREYLIINSLLGGLPTSN 311
            |..|||||.:|       ||..|.:.:|         ||||:||..|.|:.|.|...:|.:...:
  Rat   244 TVQGYWQFTVD-------RITINDEVVACQGGCPAVLDTGTALLTGPGRDILNIQHAIGAVQGQH 301

  Fly   312 NEYLLNCSEIDSLPEIVFIIGGQRFGLQPRDYVMSATND-DGSSICLSAFTLMDAEFWILGDVFI 375
            :::.::|..::.:|.:||.|.|:.|.|.|..|    ||. .||  |.|.|. ..::.||||||||
  Rat   302 DQFDIDCWRLNFMPTVVFEINGREFPLPPSAY----TNQFQGS--CSSGFR-HGSQMWILGDVFI 359

  Fly   376 GRYYTAFDAGQRRIGFAPA 394
            ..:|:.||....|:|.|.|
  Rat   360 REFYSVFDRANNRVGLAKA 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 Asp 80..394 CDD:394983 128/323 (40%)
CymNP_064476.2 A1_Propeptide 21..47 CDD:462326 6/30 (20%)
pepsin_retropepsin_like 64..377 CDD:472175 131/331 (40%)

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