DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and pgc

DIOPT Version :9

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001015682.1 Gene:pgc / 548353 XenbaseID:XB-GENE-5838607 Length:385 Species:Xenopus tropicalis


Alignment Length:410 Identity:138/410 - (33%)
Similarity:216/410 - (52%) Gaps:49/410 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WLSLWILCLFWAKCQGQLIRIPM-QFQAS------------FMASRRQHRAGRSSLLAKYNVVGG 59
            |:.....||:.::   .|:|:|: :|:::            |:.:.::..|      .|||    
 Frog     3 WIIFTFFCLYLSE---GLVRVPLKRFKSTRETMKENGVLNDFLKTHKREPA------IKYN---- 54

  Fly    60 QEVTSRNGGATETLDNRLNLEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHR 124
            ....|..|.|.|.:  .|::.|.|.||||:|.|.|.:.|||||:||||.|..|  :|.||.:|..
 Frog    55 WNSQSNFGVAYEPM--YLDIYYFGEISIGTPPQNFLVAFDTGSSNLWVASTYC--QSQACTNHPL 115

  Fly   125 YNASASSTFVPDGRRFSIAYGTGSLSGRLAQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGI 189
            :|.|.|||:..:.::||:.||:||::|.|..|||.:..|.:|||..|::..||...|..:.|.||
 Frog   116 FNPSLSSTYTSNNQQFSMWYGSGSMTGVLGYDTVTVQGLSIQNQELGLSVTEPSSFFYYSKFDGI 180

  Fly   190 VGLGFRPIAELGIKPLFESMCDQQLVDECVFSFYLKRNGSERKGGELLFGGVDKTKFSGSLTYVP 254
            .|:.::.::..|.....:.:..|.|:.:.||||||     ..:.||::|||||.:.|||.:.:.|
 Frog   181 FGMAYQSLSAGGASTAVQGLIQQNLIPQPVFSFYL-----TSQSGEVIFGGVDNSLFSGQIYWTP 240

  Fly   255 LTHAGYWQFPLDVIEVAGTR---INQNRQAIADTGTSLLAAPPREYLIINSLLGGLPTSNNEYLL 316
            :|...|||..:|...|.|..   .:|..|.|.||||.||..|.:....:...:|.....|.::|:
 Frog   241 VTQEIYWQIAIDEFSVNGQATGWCSQGCQGIVDTGTPLLTIPQQYLSTLVQYVGAQEAQNGQFLV 305

  Fly   317 NCSEIDSLPEIVFIIGGQRFGLQPRDYVMSATNDDGSSICLSAF--TLMDAE----FWILGDVFI 375
            ||:.:.:||.|.|.|.|.:|.:.|..|::..     :..|:..|  |.:.:.    .|||||||:
 Frog   306 NCNSVQNLPPISFTISGIQFSIPPSAYILQM-----NGYCVVGFESTYLPSRNGQPLWILGDVFL 365

  Fly   376 GRYYTAFDAGQRRIGFAPAA 395
            .:||:.:|.|..::|||..|
 Frog   366 RQYYSVYDFGNNQVGFASMA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 pepsin_retropepsin_like 71..392 CDD:299705 120/329 (36%)
Asp 80..394 CDD:278455 120/322 (37%)
pgcNP_001015682.1 A1_Propeptide 17..45 CDD:369623 5/27 (19%)
pepsin_retropepsin_like 71..383 CDD:386101 119/323 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54317
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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