DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and bace2

DIOPT Version :9

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:XP_009289748.1 Gene:bace2 / 449818 ZFINID:ZDB-GENE-041010-68 Length:503 Species:Danio rerio


Alignment Length:455 Identity:114/455 - (25%)
Similarity:180/455 - (39%) Gaps:112/455 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LWLSLWILCLFWAKCQGQLIRIPMQ-FQASFMAS--------RRQHRAGRSSLLAKYNVVGGQEV 62
            |.|||    .||.  ...:.:||:. |...|.||        ::...|.:|          |..:
Zfish     7 LLLSL----TFWK--SHSVFKIPLNIFAGKFNASVQLDLRPLQKNEAAAKS----------GLSL 55

  Fly    63 TSRNGGATETLDNRLNLE------YAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHH 121
            .|...|....||...||:      |...:.||:|||..|:|.||||:|..|        :.|.|.
Zfish    56 ASDPAGIVNFLDMINNLKGDSGRGYYMQMIIGTPGQTLNILVDTGSSNFAV--------AAAAHP 112

  Fly   122 H--HRYNASASSTFVPDGRRFSIAYGTGSLSGRLAQDTVAI-----GQLVVQNQTFGMATHE--- 176
            :  |.:|.:.|||:....|..::.|..|...|.|..|.:.|     |.:.:  ....:.|.|   
Zfish   113 YITHYFNRALSSTYQSTERAVAVKYTQGEWEGELGTDLITIPEGPSGAITI--NIAAILTSEGFF 175

  Fly   177 -PGPTFVDTNFAGIVGLGFRPIA--ELGIKPLFESMCDQQLVDECVFSFYLKRNG------SERK 232
             ||     .|:.||:||.:..:|  :..::|.|.|:..|..:.: |||..:...|      .:..
Zfish   176 LPG-----INWQGILGLAYPLLARPDPSVEPFFNSVVRQTGIPD-VFSLQMCGAGVPASTTGDPA 234

  Fly   233 GGELLFGGVDKTKFSGSLTYVPLTHAGYWQFPLDVIEVAGTRIN------QNRQAIADTGTSLLA 291
            ||.|:.|||:.|...|.:.|.|:....|:|..:..:||....:|      .:.:||.|:||:||.
Zfish   235 GGSLIMGGVEPTLHRGPIWYTPVLEEWYYQVEVLKLEVGDQNLNLDCKEYNSDKAIVDSGTTLLR 299

  Fly   292 APPREYLIINSLLGGLPTSNNEYLLNCSEIDS-----------------------LPEIVFIIGG 333
            .|...:           |:..:.::..|.||.                       .|::...:.|
Zfish   300 LPANVF-----------TAVVDTIMQTSLIDDFSAGFFDGTKLACWMRGESPWRFFPKVSIYLRG 353

  Fly   334 Q------RFGLQPRDYVMSATNDDGSSICLSAFTLMDAEFWILGDVFIGRYYTAFDAGQRRIGFA 392
            .      |..:.|:.|:...|:.||:..|........|...::|...:..:|..||..|:|:|||
Zfish   354 TNTSQSFRITILPQLYIQPVTDIDGTLDCFRFGISPSANGLVIGATVMEGFYVIFDRAQKRVGFA 418

  Fly   393  392
            Zfish   419  418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 pepsin_retropepsin_like 71..392 CDD:299705 95/380 (25%)
Asp 80..394 CDD:278455 93/373 (25%)
bace2XP_009289748.1 beta_secretase_like 77..439 CDD:133140 93/369 (25%)
Asp 80..418 CDD:278455 91/364 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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