DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and Ctse

DIOPT Version :10

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001388196.1 Gene:Ctse / 25424 RGDID:2446 Length:398 Species:Rattus norvegicus


Alignment Length:406 Identity:162/406 - (39%)
Similarity:234/406 - (57%) Gaps:36/406 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSLWILCLFWAKCQGQLIRIPMQFQASFMASRRQHRAGRSSLLAK-----------YNVVGGQEV 62
            |.|.:|.|..|:.||.|.|:|:          |:|::.|..|.|:           .:::...|.
  Rat     7 LLLLLLLLDLAQAQGVLHRVPL----------RRHQSLRKKLRAQGQLSDFWRSHNLDMIEFSES 61

  Fly    63 TSRNGGATETLDNRLNLEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRYNA 127
            .:.:.|..|.|.|.|::||.|.:|||||.|.|.::|||||:||||||..|:  |.||..|..::.
  Rat    62 CNVDKGINEPLINYLDMEYFGTVSIGSPSQNFTVIFDTGSSNLWVPSVYCT--SPACKAHPVFHP 124

  Fly   128 SASSTFVPDGRRFSIAYGTGSLSGRLAQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGIVGL 192
            |.|||::..|..|||.||||||:|.:..|.|::..|.|:.|.||.:..|||.|||:..|.||:||
  Rat   125 SQSSTYMEVGNHFSIQYGTGSLTGIIGADQVSVEGLTVEGQQFGESVKEPGQTFVNAEFDGILGL 189

  Fly   193 GFRPIAELGIKPLFESMCDQQLVDECVFSFYLKRNGSERKGGELLFGGVDKTKFSGSLTYVPLTH 257
            |:..:|..|:.|:|::|..|.||...:||.||..:.....|.||.|||.|.:.|||||.::|:|.
  Rat   190 GYPSLAVGGVTPVFDNMMAQNLVALPMFSVYLSSDPQGGSGSELTFGGYDPSHFSGSLNWIPVTK 254

  Fly   258 AGYWQFPLDVIEVAGTRI--NQNRQAIADTGTSLLAAPPREYLIINSLLGGLPTSNNEYLLNCSE 320
            .||||..||.|:|..|.:  ::..|||.||||||:..||::...:...:|..| .:.||.::|:.
  Rat   255 QGYWQIALDGIQVGDTVMFCSEGCQAIVDTGTSLITGPPKKIKQLQEAIGATP-MDGEYAVDCAT 318

  Fly   321 IDSLPEIVFIIGGQRFGLQPRDYVMSATND--DGSSICLSAFTLMDAE-----FWILGDVFIGRY 378
            ::.:|.:.|:|.|..:.|.|..|::.   |  ||...|.|.|..:|.:     .||||||||.::
  Rat   319 LNMMPNVTFLINGVSYTLSPTAYILP---DLVDGMQFCGSGFQGLDIQPPAGPLWILGDVFIRKF 380

  Fly   379 YTAFDAGQRRIGFAPA 394
            |:.||.|..::|.|||
  Rat   381 YSVFDRGNNQVGLAPA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 Asp 80..394 CDD:394983 139/322 (43%)
CtseNP_001388196.1 A1_Propeptide 25..51 CDD:462326 7/35 (20%)
pepsin_retropepsin_like 80..395 CDD:472175 137/320 (43%)

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