DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and yps1

DIOPT Version :10

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_588035.1 Gene:yps1 / 2538927 PomBaseID:SPCC1795.09 Length:521 Species:Schizosaccharomyces pombe


Alignment Length:449 Identity:96/449 - (21%)
Similarity:161/449 - (35%) Gaps:101/449 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LSLWILCLFWAKCQGQLIRIPMQFQ--------ASFMASRRQHRAGRSSLLAKYNVVGGQEVTSR 65
            :.:|||..|      ..|::....|        ..|:|....::.         |.:..::.|..
pombe     1 MRIWILIFF------SFIKLVSSLQYTGNGVLALDFVAKTFPNQE---------NQLEKRDYTYS 50

  Fly    66 NGGATE-TLDNRLNLEYAGPISIGSPGQPFNMLFDTGSANLWVP--------------------- 108
            ..|.|. .||.:....|...:|||.|...:.:..|......|:.                     
pombe    51 PSGITSFPLDLQSYTYYTTTLSIGRPSISYTVAIDLDMPYTWLTYYNVMAFNPAYLGIVNSGTQW 115

  Fly   109 SAE------CSPKSVACHHHHRYNASASSTFVPDGRRFSIAYGTG-SLSGRLAQDTVAIGQL-VV 165
            |.:      |..:|.:|:..   |||:|..||.....|.|.|... :::|...||:::.... .:
pombe   116 STDELRYFLCKKESDSCYFG---NASSSFHFVTSPSTFFIRYDDNITVAGINVQDSLSYSHYQAL 177

  Fly   166 QNQTFGMATHEPGPTFVDTNFAGIVGL----------------GFRPIAELGIKPLF-ESMCDQQ 213
            .:..||:...|..|:.: ..:.|::||                .|.|       |.| |.:..:.
pombe   178 PDFQFGITLKEYVPSSM-LPYKGVLGLAASTEINSIDYSDSISSFSP-------PTFLEQLVKED 234

  Fly   214 LVDECVFSFYLKRNGSERKGGELLFGGVDKTKFSGSLTYVPLTHAGYWQFPLDVIEVAGTRINQN 278
            ::....||.||...|:    |.||.|.||.:|:.|....:..|...::...:..::...:....|
pombe   235 ILAYPAFSMYLDNQGN----GSLLLGAVDTSKYQGQFVALKQTKLTHYAVSIYSVQFLNSTFFSN 295

  Fly   279 RQAIAD----TGTSLLAAPPR-EYLIINSLLGGLPTSNNEYLLNCSEIDSLPEIVFIIGGQRFGL 338
            ...|.|    |..:.:..|.. .|.::::  .|...|...:.|||.|||....::|     :||.
pombe   296 YSIITDAYFQTRETYIYLPAELAYSVMDN--AGAYLSEGYFALNCDEIDLEAALIF-----QFGC 353

  Fly   339 QPRDYVMSATNDDG--SSICLSAF-TLMDAEFWILGDVFIGRYYTAFDAGQRRIGFAPA 394
            .....|..:....|  |:|||... ...|:|. :||.:|....||.:...|:.|....|
pombe   354 NSTIKVPISLLVIGQVSNICLLGIRPSTDSEI-VLGLLFFRNAYTFYHQSQKMIAIGQA 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 Asp 80..394 CDD:394983 81/367 (22%)
yps1NP_588035.1 pepsin_retropepsin_like 66..411 CDD:472175 81/367 (22%)

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