DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and Pgc

DIOPT Version :10

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_579818.1 Gene:Pgc / 24864 RGDID:3943 Length:392 Species:Rattus norvegicus


Alignment Length:398 Identity:140/398 - (35%)
Similarity:214/398 - (53%) Gaps:24/398 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WLSLWILCLFWAKCQGQLIRIPMQFQASFMASRRQHRAGRSSLLA-KYNVVGGQEVTSRNGGATE 71
            |:.:.:|||  ...:..|:|:|::...|...:.::....:..|.. ||:  .||:....|.|...
  Rat     3 WMVVALLCL--PLLEASLLRVPLRKMKSIRETMKEQGVLKDFLKTHKYD--PGQKYHFGNFGDYS 63

  Fly    72 TLDN---RLNLEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRYNASASSTF 133
            .|..   .::..|.|.||||:|.|.|.:||||||:||||.|..|  :|.||..|.|:|.|.|||:
  Rat    64 VLYEPMAYMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYC--QSEACTTHARFNPSKSSTY 126

  Fly   134 VPDGRRFSIAYGTGSLSGRLAQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGIVGLGFRPIA 198
            ..:|:.||:.||||||:|....||:.:..:.|.||.||::.:|||..||...|.||:||.:..::
  Rat   127 YTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLS 191

  Fly   199 ELGIKPLFESMCDQQLVDECVFSFYLKRNGSER--KGGELLFGGVDKTKFSGSLTYVPLTHAGYW 261
            ..|.....:.|..:..:.:.:|..||   ||::  .||:::||||||..::|.:|:||:|...||
  Rat   192 SGGATTALQGMLGEGALSQPLFGVYL---GSQQGSNGGQIVFGGVDKNLYTGEITWVPVTQELYW 253

  Fly   262 QFPLDVI----EVAGTRINQNRQAIADTGTSLLAAPPREYLIINSLLGGLPTSNNEYLLNCSEID 322
            |..:|..    :.:|...:|..|.|.|||||||..|.:....:...:|.......||.::|..:.
  Rat   254 QITIDDFLIGDQASGWCSSQGCQGIVDTGTSLLVMPAQYLSELLQTIGAQEGEYGEYFVSCDSVS 318

  Fly   323 SLPEIVFIIGGQRFGLQPRDYVMSATNDDGSSICLSAFTLMDAE---FWILGDVFIGRYYTAFDA 384
            |||.:.|::.|.:|.|.|..|::.  .|:...:.|.:.:|....   .|||||||:..||..||.
  Rat   319 SLPTLSFVLNGVQFPLSPSSYIIQ--EDNFCMVGLESISLTSESGQPLWILGDVFLRSYYAIFDM 381

  Fly   385 GQRRIGFA 392
            |..::|.|
  Rat   382 GNNKVGLA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 Asp 80..394 CDD:394983 124/322 (39%)
PgcNP_579818.1 A1_Propeptide 20..46 CDD:462326 4/25 (16%)
pepsin_retropepsin_like 73..391 CDD:472175 124/324 (38%)

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