DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5863 and bace2

DIOPT Version :9

Sequence 1:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_001135590.1 Gene:bace2 / 100216145 XenbaseID:XB-GENE-1014090 Length:499 Species:Xenopus tropicalis


Alignment Length:378 Identity:97/378 - (25%)
Similarity:168/378 - (44%) Gaps:56/378 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GQEVTSRNGGATETLDNRLNLE------YAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSV 117
            |..:.|..||.........|||      |...:.||:|.|..|:|.||||:|..|..| .:|...
 Frog    47 GLLLASDPGGQINFFSMVNNLEGDSGRGYYLELLIGTPPQKMNILVDTGSSNFAVAGA-LNPDIT 110

  Fly   118 ACHHHHRYNASASSTFVPDGRRFSIAYGTGSLSGRLAQDTVAIGQLVVQNQTF--GMATHEPGPT 180
            ..     :::..|:::.|...:.::.|..||.:|.|.:|.:::.:.|  |.||  .:|:......
 Frog   111 TF-----FDSKLSTSYEPLNTQVTVRYTQGSWTGLLGKDVISMPKGV--NGTFLINIASIFQSEN 168

  Fly   181 FV--DTNFAGIVGLGFRPIAE--LGIKPLFESMCDQQLVDECVFSFYLKRNGSERKG-----GEL 236
            |.  :.|:.||:||.:..:|:  ..::|.|:|:..|:.:.. :||..:...|....|     |.|
 Frog   169 FFLPNINWQGILGLAYSTLAKPSSSVEPFFDSLVQQENIPN-IFSMQMCGAGQPSPGIGINAGSL 232

  Fly   237 LFGGVDKTKFSGSLTYVPLTHAGYWQFPLDVIEVAGTRIN------QNRQAIADTGTSLLAAPPR 295
            :.||::.:.:.|.:.|.|:|...|:|..:...||.|..:|      .:.:||.|:||:||..|.:
 Frog   233 VLGGIEPSLYQGDIWYTPITEEWYYQVEVLKFEVGGQNLNLDCTVYNSDKAIVDSGTTLLRLPDK 297

  Fly   296 EYLIINSLLGGL-PTS-----NNEY----LLNC-----SEIDSLPEIVFIIGGQ------RFGLQ 339
               :.|:::..: .||     |.|:    .|.|     ...:..|:|...:...      |..|:
 Frog   298 ---VFNAMVDAIVQTSLIQNFNAEFWAGLQLACWDKTQDPWNYFPDISIYLRDTNSSRSFRLTLK 359

  Fly   340 PRDYVMSATNDDGSSICLSAFTLMDAEFWILGDVFIGRYYTAFDAGQRRIGFA 392
            |:.|:.|......|..|........|...::|...:..:|..||..::|:|||
 Frog   360 PQLYIQSVLTFQESLNCFRFGISQSASALVIGATVMEGFYVIFDRAEKRVGFA 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5863NP_650623.1 pepsin_retropepsin_like 71..392 CDD:299705 91/364 (25%)
Asp 80..394 CDD:278455 91/357 (25%)
bace2NP_001135590.1 beta_secretase_like 72..433 CDD:133140 90/353 (25%)
Asp 75..412 CDD:278455 88/348 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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