DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and YPS3

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_013222.1 Gene:YPS3 / 850812 SGDID:S000004111 Length:508 Species:Saccharomyces cerevisiae


Alignment Length:395 Identity:103/395 - (26%)
Similarity:170/395 - (43%) Gaps:68/395 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KILKVPLYVRRSFNESEVFLARSATEGGETLQLQLLLQTHNNMEYYGT-IAMGNPRQNFTVIFDT 83
            |.:|:|...:::.:..|:   ...:.|.|...|.      |...:|.. :|:|.|.||.||:.||
Yeast    27 KYVKIPFTKKKNGDNGEL---SKRSNGHEKFVLA------NEQSFYSVELAIGTPSQNLTVLLDT 82

  Fly    84 GSSNTWLPSVNCPMSNSA--CQNHRKYNSSRSSSYIPDGRN-FTLRYGSGMVV-GYLSKDTMHIA 144
            ||::.|:|....|...|.  |..:..::.::||::..:..: |...||.|... |...:|.:...
Yeast    83 GSADLWVPGKGNPYCGSVMDCDQYGVFDKTKSSTFKANKSSPFYAAYGDGTYAEGAFGQDKLKYN 147

  Fly   145 GAELPHFTFGESLFLQHFAFSSVKFDGLVGLGLGVL----------------SWSNTTPFLELLC 193
            ..:|...:|.       .|..|....|::|:||..|                .:.|...||:...
Yeast   148 ELDLSGLSFA-------VANESNSTFGVLGIGLSTLEVTYSGKVAIMDKRSYEYDNFPLFLKHSG 205

  Fly   194 AQRLLEKCVFSVYLRRDPR---EIVFGGFDESKFEGKLHYVPV-----SQ--WHTWSLQISKSSV 248
            |   ::...:|::|..:.:   .|:||..|.||:||:|:.:|:     ||  .|..:..::...:
Yeast   206 A---IDATAYSLFLNDESQSSGSILFGAVDHSKYEGQLYTIPLVNLYKSQGYQHPVAFDVTLQGL 267

  Fly   249 GTKQIGGKSN---------AILDTGTSLVLVPQQTYHNLLNTLSAKLQN--GYFVVAC-KSGSLP 301
            |.:.  .|.|         |:||:||:|..:|.|....|..:|:|....  ||:...| .|.:..
Yeast   268 GLQT--DKRNITLTTTKLPALLDSGTTLTYLPSQAVALLAKSLNASYSKTLGYYEYTCPSSDNKT 330

  Fly   302 NINILIGDKVFPLTSSDYIMEVLLDRKPACVLAIAP-INRGFWVLGDIFLRRYYTVFDATEKRIG 365
            ::....|........||:.|:..:.   .|||||.| ......:|||.|||..|.|:|.....|.
Yeast   331 SVAFDFGGFRINAPLSDFTMQTSVG---TCVLAIIPQAGNATAILGDSFLRNAYVVYDLDNYEIS 392

  Fly   366 LAKAK 370
            ||:||
Yeast   393 LAQAK 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 92/350 (26%)
Asp 63..369 CDD:278455 93/349 (27%)
YPS3NP_013222.1 SAP_like 61..396 CDD:133141 93/349 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341765
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S917
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.650

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