DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and YPS1

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_013221.1 Gene:YPS1 / 850811 SGDID:S000004110 Length:569 Species:Saccharomyces cerevisiae


Alignment Length:493 Identity:117/493 - (23%)
Similarity:186/493 - (37%) Gaps:155/493 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AFLSLVFATQ------------------KILKVPLYVRRSFNES----------EVFLARSATEG 46
            |.||.:||:|                  |.:|:|.:  :.:.:|          ||.|.:.| :|
Yeast     9 AVLSSLFASQVLGKIIPAANKRDDDSNSKFVKLPFH--KLYGDSLENVGSDKKPEVRLLKRA-DG 70

  Fly    47 GETLQLQLLLQTHNNMEYYGT-IAMGNPRQNFTVIFDTGSSNTWLPSVNCP--MSNSACQNHRKY 108
            .|.:.:.      |...:|.. :.:|.|.||.||:.|||||:.|:...:.|  .|||...:.|:.
Yeast    71 YEEIIIT------NQQSFYSVDLEVGTPPQNVTVLVDTGSSDLWIMGSDNPYCSSNSMGSSRRRV 129

  Fly   109 -----NSSRSSSYIPDGRNFTLRYGSGMVVGYLSKD--------TMHIAGAEL-----PHFTF-- 153
                 :||...|.|.|...|....|:|..:|..:..        |..:..:|.     .:.||  
Yeast   130 IDKRDDSSSGGSLINDINPFGWLTGTGSAIGPTATGLGGGSGTATQSVPASEATMDCQQYGTFST 194

  Fly   154 -GESLFLQHFAFSSVKF-DG------------------LVGLGLGVLSWSNTT--------PFLE 190
             |.|.|..:..:.|:.: ||                  :.||...|.:.:|:|        |.||
Yeast   195 SGSSTFRSNNTYFSISYGDGTFASGTFGTDVLDLSDLNVTGLSFAVANETNSTMGVLGIGLPELE 259

  Fly   191 ----------------------LLCAQRLLEKCVFSVYLRRDPR---EIVFGGFDESKFEGKLHY 230
                                  :|.....::...:|:||.....   .|:||..|.||:.|.|:.
Yeast   260 VTYSGSTASHSGKAYKYDNFPIVLKNSGAIKSNTYSLYLNDSDAMHGTILFGAVDHSKYTGTLYT 324

  Fly   231 VPVSQWHTWS-------LQISKSSVGTKQIGGKSN---------AILDTGTSLVLVPQQTYHNLL 279
            :|:....:.|       ..::.:.:|... .|.||         |:||:||:|..:||.....:.
Yeast   325 IPIVNTLSASGFSSPIQFDVTINGIGISD-SGSSNKTLTTTKIPALLDSGTTLTYLPQTVVSMIA 388

  Fly   280 NTLSAKLQN--GYFVVACKSGSLPNINILIGDKVF---------PLTSSDYIMEVLLDRKPACVL 333
            ..|.|:..:  ||:|:.|.|.....|       ||         ||:|      .:|.....|:|
Yeast   389 TELGAQYSSRIGYYVLDCPSDDSMEI-------VFDFGGFHINAPLSS------FILSTGTTCLL 440

  Fly   334 AIAPINRGF-WVLGDIFLRRYYTVFDATEKRIGLAKAK 370
            .|.|.:... .:|||.||...|.|:|.....|.:|:|:
Yeast   441 GIIPTSDDTGTILGDSFLTNAYVVYDLENLEISMAQAR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 98/410 (24%)
Asp 63..369 CDD:278455 99/409 (24%)
YPS1NP_013221.1 SAP_like 81..477 CDD:133141 99/409 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341764
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.700

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