DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and AT1G62290

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001031219.1 Gene:AT1G62290 / 842526 AraportID:AT1G62290 Length:513 Species:Arabidopsis thaliana


Alignment Length:460 Identity:128/460 - (27%)
Similarity:190/460 - (41%) Gaps:130/460 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RSFNESEVFLARSATEGGETLQLQLL-LQTHNNMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSV 93
            ||:|.:         .||::....:: |:.:.:.:|||.||:|.|.|.|||||||||||.|:||.
plant    63 RSYNNN---------LGGDSGDADIVPLKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWVPSG 118

  Fly    94 NCPMSNSACQNHRKYNSSRSSSYIPDGRNFTLRYGSGMVVGYLSKDTMHIAGAELPHFTFGESLF 158
            .|..|.| |..|.||.|||||:|...|:...:.||||.:.|:.|.|.:.:....:....|.|:..
plant   119 KCFFSLS-CYFHAKYKSSRSSTYKKSGKRAAIHYGSGSISGFFSYDAVTVGDLVVKDQEFIETTS 182

  Fly   159 LQHFAFSSVKFDGLVGLGLGVLSWSNTTPFLELLCAQRLLEKCVFSVYLRRDPR-----EIVFGG 218
            .....|...|||||:|||...::..|.||....:..|.|:::.|||.:|.|||:     ||||||
plant   183 EPGLTFLVAKFDGLLGLGFQEIAVGNATPVWYNMLKQGLIKRPVFSFWLNRDPKSEEGGEIVFGG 247

  Fly   219 FDESKFEGKLHYVPVSQWHTWSLQISK---SSVGTKQIGGKSNAILDTGTSLVLVP--------- 271
            .|...|.|:..:|||:|...|...:.:   :...|...|...:||.|:||||:..|         
plant   248 VDPKHFRGEHTFVPVTQRGYWQFDMGEVLIAGESTGYCGSGCSAIADSGTSLLAGPTAVVAMINK 312

  Fly   272 ----------------------------------------------------------------- 271
                                                                             
plant   313 AIGASGVVSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLCAYDGTHGVSMGIESVVDKENTR 377

  Fly   272 -----------------------------QQTYHNLLNTLSAKL--QNGYFVVACKS-GSLPNIN 304
                                         |:...|.:|.:..::  .||...|.|.. ..:|.::
plant   378 SSSGLRDAGCPACEMAVVWIQSQLRQNMTQERIVNYINEICERMPSPNGESAVDCSQLSKMPTVS 442

  Fly   305 ILIGDKVFPLTSSDYIMEVLLDRKPACV-----LAIAPINRGFWVLGDIFLRRYYTVFDATEKRI 364
            ..||.|||.|...:|::::.......|:     |.|.|.....|:|||:|:.:|:||||...:::
plant   443 FTIGGKVFDLAPEEYVLKIGEGPVAQCISGFTALDIPPPRGPLWILGDVFMGKYHTVFDFGNEQV 507

  Fly   365 GLAKA 369
            |.|:|
plant   508 GFAEA 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 120/425 (28%)
Asp 63..369 CDD:278455 121/424 (29%)
AT1G62290NP_001031219.1 PLN03146 7..>143 CDD:178691 41/89 (46%)
phytepsin 79..511 CDD:133162 121/432 (28%)
SapB_2 322..355 CDD:397523 0/32 (0%)
SapB_1 387..422 CDD:398724 3/34 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.880

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