DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5860 and AT1G62290

DIOPT Version :10

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_176419.2 Gene:AT1G62290 / 842526 AraportID:AT1G62290 Length:513 Species:Arabidopsis thaliana


Alignment Length:460 Identity:128/460 - (27%)
Similarity:190/460 - (41%) Gaps:130/460 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RSFNESEVFLARSATEGGETLQLQLL-LQTHNNMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSV 93
            ||:|.:         .||::....:: |:.:.:.:|||.||:|.|.|.|||||||||||.|:||.
plant    63 RSYNNN---------LGGDSGDADIVPLKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWVPSG 118

  Fly    94 NCPMSNSACQNHRKYNSSRSSSYIPDGRNFTLRYGSGMVVGYLSKDTMHIAGAELPHFTFGESLF 158
            .|..|.| |..|.||.|||||:|...|:...:.||||.:.|:.|.|.:.:....:....|.|:..
plant   119 KCFFSLS-CYFHAKYKSSRSSTYKKSGKRAAIHYGSGSISGFFSYDAVTVGDLVVKDQEFIETTS 182

  Fly   159 LQHFAFSSVKFDGLVGLGLGVLSWSNTTPFLELLCAQRLLEKCVFSVYLRRDPR-----EIVFGG 218
            .....|...|||||:|||...::..|.||....:..|.|:::.|||.:|.|||:     ||||||
plant   183 EPGLTFLVAKFDGLLGLGFQEIAVGNATPVWYNMLKQGLIKRPVFSFWLNRDPKSEEGGEIVFGG 247

  Fly   219 FDESKFEGKLHYVPVSQWHTWSLQISK---SSVGTKQIGGKSNAILDTGTSLVLVP--------- 271
            .|...|.|:..:|||:|...|...:.:   :...|...|...:||.|:||||:..|         
plant   248 VDPKHFRGEHTFVPVTQRGYWQFDMGEVLIAGESTGYCGSGCSAIADSGTSLLAGPTAVVAMINK 312

  Fly   272 ----------------------------------------------------------------- 271
                                                                             
plant   313 AIGASGVVSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLCAYDGTHGVSMGIESVVDKENTR 377

  Fly   272 -----------------------------QQTYHNLLNTLSAKL--QNGYFVVACKS-GSLPNIN 304
                                         |:...|.:|.:..::  .||...|.|.. ..:|.::
plant   378 SSSGLRDAGCPACEMAVVWIQSQLRQNMTQERIVNYINEICERMPSPNGESAVDCSQLSKMPTVS 442

  Fly   305 ILIGDKVFPLTSSDYIMEVLLDRKPACV-----LAIAPINRGFWVLGDIFLRRYYTVFDATEKRI 364
            ..||.|||.|...:|::::.......|:     |.|.|.....|:|||:|:.:|:||||...:::
plant   443 FTIGGKVFDLAPEEYVLKIGEGPVAQCISGFTALDIPPPRGPLWILGDVFMGKYHTVFDFGNEQV 507

  Fly   365 GLAKA 369
            |.|:|
plant   508 GFAEA 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 Asp 63..369 CDD:394983 121/424 (29%)
AT1G62290NP_176419.2 PLN03146 7..>143 CDD:178691 41/89 (46%)
phytepsin 79..511 CDD:133162 121/432 (28%)
SapB_2 322..355 CDD:460945 0/32 (0%)
SapB_1 387..422 CDD:461575 3/34 (9%)

Return to query results.
Submit another query.