DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and AT4G04460

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_192355.1 Gene:AT4G04460 / 825776 AraportID:AT4G04460 Length:508 Species:Arabidopsis thaliana


Alignment Length:505 Identity:143/505 - (28%)
Similarity:208/505 - (41%) Gaps:145/505 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLCFLLAFLSLVF---------ATQKI-LKVPLYVRRSFNESEVFLARSATEGGETLQLQL---- 54
            :|.|||:.|.|:.         .|.:| ||.....|.:...|::||....:........:|    
plant     9 LLVFLLSCLILISTASCERNGDGTIRIGLKKRKLDRSNRLASQLFLKNRGSHWSPKHYFRLNDEN 73

  Fly    55 ----LLQTHNNMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSVNCPMSNSACQNHRKYNSSRSSS 115
                .|:.:.:.:|||.|.:|.|.|.|||||||||||.|:||..|.:| .||..|.||.:|:|||
plant    74 ADMVPLKNYLDAQYYGDITIGTPPQKFTVIFDTGSSNLWIPSTKCYLS-VACYFHSKYKASQSSS 137

  Fly   116 YIPDGRNFTLRYGSGMVVGYLSKDTMHIAGAELPHFTFGESLFLQHFAFSSVKFDGLVGLGLGVL 180
            |..:|:..::|||:|.:.||.|.|.:.:....:....|.|:.......|...||||::|||...:
plant   138 YRKNGKPASIRYGTGAISGYFSNDDVKVGDIVVKEQEFIEATSEPGITFLLAKFDGILGLGFKEI 202

  Fly   181 SWSNTTPFLELLCAQRLLEKCVFSVYLRRDPR-----EIVFGGFDESKFEGKLHYVPVSQWHTWS 240
            |..|:||....:..:.|:::.:||.:|.|:|:     ||||||.|...|:|:..:|||:....|.
plant   203 SVGNSTPVWYNMVEKGLVKEPIFSFWLNRNPKDPEGGEIVFGGVDPKHFKGEHTFVPVTHKGYWQ 267

  Fly   241 LQISKSSVGTKQIGGK--------SNAILDTGTSLVLVP-------------------------Q 272
            .     .:|..||.||        .:||.|:||||:..|                         .
plant   268 F-----DMGDLQIAGKPTGYCAKGCSAIADSGTSLLTGPSTVITMINHAIGAQGIVSRECKAVVD 327

  Fly   273 QTYHNLLNTLSAK---------------------------------------------------- 285
            |....:||:|.|:                                                    
plant   328 QYGKTMLNSLLAQEDPKKVCSQIGVCAYDGTQSVSMGIQSVVDDGTSGLLNQAMCSACEMAAVWM 392

  Fly   286 -------------------------LQNGYFVVAC-KSGSLPNINILIGDKVFPLTSSDYIMEVL 324
                                     .||....|.| :..|:|.:...||.:.|.||..|||.::.
plant   393 ESELTQNQTQERILAYAAELCDHIPTQNQQSAVDCGRVSSMPIVTFSIGGRSFDLTPQDYIFKIG 457

  Fly   325 LDRKPAC-----VLAIAPINRGFWVLGDIFLRRYYTVFDATEKRIGLAKA 369
            ...:..|     .:.|||.....|:|||||:..|:||||..:.|:|.|||
plant   458 EGVESQCTSGFTAMDIAPPRGPLWILGDIFMGPYHTVFDYGKGRVGFAKA 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 124/427 (29%)
Asp 63..369 CDD:278455 125/426 (29%)
AT4G04460NP_192355.1 phytepsin 77..506 CDD:133162 125/434 (29%)
SapB_2 321..353 CDD:367521 5/31 (16%)
SapB_1 380..417 CDD:368325 0/36 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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