DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and AT3G02740

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_186923.1 Gene:AT3G02740 / 821256 AraportID:AT3G02740 Length:488 Species:Arabidopsis thaliana


Alignment Length:459 Identity:102/459 - (22%)
Similarity:159/459 - (34%) Gaps:138/459 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FLSLVFATQKILKVPLY-VRRSFNESEVFLARSATEGGETLQLQLL----LQTHNNM-------- 62
            |||.:..:..:|..|.: ...:.:|:.||..||...|.....|..|    :..|:.:        
plant     9 FLSAILLSAALLIDPQFSTAATASENLVFEVRSKFAGKRVKDLGALRAHDVHRHSRLLSAIDIPL 73

  Fly    63 ----------EYYGTIAMGNPRQNFTVIFDTGSSNTWL---PSVNCP------------------ 96
                      .|:..|.:|.|.::|.|..||||...|:   ..:.||                  
plant    74 GGDSQPESIGLYFAKIGLGTPSRDFHVQVDTGSDILWVNCAGCIRCPRKSDLVELTPYDVDASST 138

  Fly    97 -MSNSACQNHRKYNSSRSSSYIPDGRNFTLRYGSGMVV-GYLSKDTMH---IAGAELPHFTFGES 156
             .|.|...|...|.:.||..:......:.:.||.|... |||.||.:|   :.|......|.|..
plant   139 AKSVSCSDNFCSYVNQRSECHSGSTCQYVIMYGDGSSTNGYLVKDVVHLDLVTGNRQTGSTNGTI 203

  Fly   157 LF------LQHFAFSSVKFDGLVGLGLGVLSWSNTTPFLELLCAQ----RLLEKC--------VF 203
            :|      ......|....||::|.|      .:.:.|:..|.:|    |....|        :|
plant   204 IFGCGSKQSGQLGESQAAVDGIMGFG------QSNSSFISQLASQGKVKRSFAHCLDNNNGGGIF 262

  Fly   204 SVYLRRDPREIVFGGFDESKFEGKLHYVP-VSQWHTWSLQISKSSVGTKQIGGKSNA-------- 259
            ::      .|:|         ..|:...| :|:...:|:.::...||...:...|||        
plant   263 AI------GEVV---------SPKVKTTPMLSKSAHYSVNLNAIEVGNSVLELSSNAFDSGDDKG 312

  Fly   260 -ILDTGTSLVLVPQQTYHNLLNTLSAK--------LQNGY--FVVACKSGSLPNINILIGDK--- 310
             |:|:||:||.:|...|:.|||.:.|.        :|..:  |....|....|.:.... ||   
plant   313 VIIDSGTTLVYLPDAVYNPLLNEILASHPELTLHTVQESFTCFHYTDKLDRFPTVTFQF-DKSVS 376

  Fly   311 --VFPLTSSDYIMEVL------------LDRKPACVLAIAPINRGFWVLGDIFLRRYYTVFDATE 361
              |:|   .:|:.:|.            |..|....|.|         |||:.|.....|:|...
plant   377 LAVYP---REYLFQVREDTWCFGWQNGGLQTKGGASLTI---------LGDMALSNKLVVYDIEN 429

  Fly   362 KRIG 365
            :.||
plant   430 QVIG 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 88/404 (22%)
Asp 63..369 CDD:278455 88/384 (23%)
AT3G02740NP_186923.1 pepsin_A_like_plant 85..439 CDD:133143 88/383 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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