DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and Pga5

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_068521.1 Gene:Pga5 / 60372 RGDID:621573 Length:387 Species:Rattus norvegicus


Alignment Length:390 Identity:131/390 - (33%)
Similarity:201/390 - (51%) Gaps:42/390 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LSLVFATQKILKVPLYVRRSFNES--EVFLARSATEGGETLQLQLLLQTHNN------------- 61
            |.||..::.::|:||...:|..|:  |..:.:...|.....:..:||:...|             
  Rat     7 LGLVALSECLVKIPLMKIKSMRENLRESHMLKDYLEKYPRSRAHVLLEQRRNPSVTYEPMRNYLD 71

  Fly    62 MEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSVNCPMSNSACQNHRKYNSSRSSSYIPDGRNFTLR 126
            :.|.|||::|.|.|.|.|:.|||||:.|:||:.|  |:.||.:|:.:|..:||:::..||...:.
  Rat    72 LVYIGTISIGTPPQEFKVVLDTGSSDLWVPSIYC--SSPACAHHKVFNPLQSSTFLVSGRPVNVA 134

  Fly   127 YGSGMVVGYLSKDTMHIAGAELPHFTFGESL-----FLQHFAFSSVKFDGLVGLGLGVLSWSNTT 186
            ||||.:.|:|:.||:.|....:....||.||     |::|     ..|||::|||...|.....|
  Rat   135 YGSGEMSGFLAYDTVKIGDLTVVAQAFGLSLEEPGRFMEH-----AVFDGILGLGYPNLGLQGVT 194

  Fly   187 PFLELLCAQRLLEKCVFSVYLRRDPRE---IVFGGFDESKFEGKLHYVPVSQWHTWSLQISKSSV 248
            |..:.|..|.|:.:.:|:.||.....:   ::.||.|.|.:.|:||:||||:...|.|.:...|:
  Rat   195 PVFDNLWIQGLIPQNLFAFYLSSKDEKGSVLMLGGVDPSYYHGELHWVPVSKPSYWQLAVDSISM 259

  Fly   249 GTKQIG--GKSNAILDTGTSLVLVPQQTYHNLLNTLSAKLQ-NGYFVVACKS-GSLPNINILIGD 309
            ..:.|.  |....|:|||||||..|:.:..|:.|.:.||.. :|.:.:.|.: .:||:|...|..
  Rat   260 NGEIIACDGGCQGIMDTGTSLVTGPRSSILNIQNLIGAKASGDGEYFLKCDTINTLPDIVFTIDS 324

  Fly   310 KVFPLTSSDYIMEVLLDRKPACVLAIA-----PINRGFWVLGDIFLRRYYTVFDATEKRIGLAKA 369
            ..:|:.:|.||.:   |....|.....     |.:...|||||:|||.|:||||....|||||.|
  Rat   325 VTYPVPASAYIRK---DHSHNCRSNFEESTDDPSDPELWVLGDVFLRLYFTVFDRANNRIGLASA 386

  Fly   370  369
              Rat   387  386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 117/336 (35%)
Asp 63..369 CDD:278455 117/322 (36%)
Pga5NP_068521.1 A1_Propeptide 16..44 CDD:285240 7/27 (26%)
pepsin_retropepsin_like 64..385 CDD:299705 116/330 (35%)
Asp 74..386 CDD:278455 117/321 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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