DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and CG17283

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_650621.1 Gene:CG17283 / 42094 FlyBaseID:FBgn0038505 Length:465 Species:Drosophila melanogaster


Alignment Length:387 Identity:113/387 - (29%)
Similarity:192/387 - (49%) Gaps:51/387 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SLVFATQKILKVPL-----YVRRSFN--ESEVFLAR------SATEGGETLQLQLLLQTHNNMEY 64
            |:|.:......:||     :||.:.|  ..:.|||.      :.:.|..|      |:...||||
  Fly    92 SIVRSDSSYATLPLDFQQNFVRTTDNLRSEKAFLANRYGFSFAKSSGTAT------LKNTANMEY 150

  Fly    65 YGTIAMGNPRQNFTVIFDTGSSNTWLPSVNCPMSNSACQNHRKYNSSRSSSYIPDGRNFTLRYGS 129
            ...:.:|.|:|.|||:.||||||.|:|..:|  .:.||:.|::|:.::||:|:.:|::|.:.|||
  Fly   151 TCKMNIGTPKQKFTVLPDTGSSNIWVPGPHC--KSKACKKHKQYHPAKSSTYVKNGKSFAITYGS 213

  Fly   130 GMVVGYLSKDTMHIAGAELPHFTFGESLFLQHFAFSSVKFDGLVGLGLGVLSWSNTTPFLELLCA 194
            |.|.|.|:|||:.|||..:.:.||..:.......|.:..|||::|||...::..|....::.:|:
  Fly   214 GSVAGVLAKDTVRIAGLVVTNQTFAMTTKEPGTTFVTSNFDGILGLGYRSIAVDNVKTLVQNMCS 278

  Fly   195 QRLLEKCVFSVYLRRDPRE-----IVFGGFDESKFEG--KLHYVPVSQWHTWSLQISKSSVGTKQ 252
            :.::..|.|::.::.....     |:||..:.|.:.|  ...|.||::...|...:....||..:
  Fly   279 EDVITSCKFAICMKGGGSSSRGGAIIFGSSNTSAYSGSNSYTYTPVTKKGYWQFTLQDIYVGGTK 343

  Fly   253 IGGKSNAILDTGTSLVLVPQQTYHNLLNTLSAKLQNGYFVVACKSGS-----------LPNINIL 306
            :.|...||:|:||||:..|...| |.:|.          |:.|::.|           :|:...:
  Fly   344 VSGSVQAIVDSGTSLITAPTAIY-NKINK----------VIGCRATSSGECWMKCAKKIPDFTFV 397

  Fly   307 IGDKVFPLTSSDYIMEVLLDR-KPACVLAIAPINRGFWVLGDIFLRRYYTVFDATEKRIGLA 367
            |..|.|.:..:...::|..:| :..|:.|:..:.....:|||.|:|.:.|.||....|||.|
  Fly   398 IAGKKFVVKGNKMKLKVRTNRGRTVCISAVTEVPDEPVILGDAFIRHFCTEFDLANNRIGFA 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 100/326 (31%)
Asp 63..369 CDD:278455 98/324 (30%)
CG17283NP_650621.1 pepsin_retropepsin_like 142..459 CDD:299705 100/329 (30%)
Asp 149..460 CDD:278455 98/324 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439938
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.800

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