DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and asp-2

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_872129.1 Gene:asp-2 / 34700645 WormBaseID:WBGene00000215 Length:429 Species:Caenorhabditis elegans


Alignment Length:432 Identity:118/432 - (27%)
Similarity:198/432 - (45%) Gaps:77/432 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LCFLLAFLSLVFATQKILKVPL-----YVRRSFNESEVFLARSATEGGETLQLQLLLQTHNNME- 63
            |..|||.::...|.  :::|||     |..|...|......|...|    ::..::.:..|:|. 
 Worm     4 LFLLLALVAAALAA--VVQVPLVKIEPYRNRLIREGRWVQYRKDRE----IRRFMMNKQSNDMSV 62

  Fly    64 -----------YYGTIAMGNPRQNFTVIFDTGSSNTWLPSVNC---PMSNS-------------- 100
                       |.|.|.:|.|:|.|.||.||||||.|:|.:.|   |.:.|              
 Worm    63 GQYVNDYEDEAYVGNITIGTPQQQFKVILDTGSSNLWIPDITCGTKPENCSTVPACRGIICQFEC 127

  Fly   101 --------------ACQNHRKYNSSRSSSYIPDGRNFTLRYGSGMVVGYLSKDTMHIAG-----A 146
                          :|....|:::|:||||..:||||.:.||:|...|:|.:||:...|     .
 Worm   128 DDQACCGAGANYTDSCFYQNKFDASKSSSYKTNGRNFIIEYGTGSARGFLGQDTITFGGIGEPQL 192

  Fly   147 ELPHFTFGESLFLQHFAFSSVKFDGLVGLGLGVLSWSN-TTPFLELLCAQRLLEKCVFSVYLRRD 210
            .:|:..||::..|..| |.....||::||....::... |.||:..: .|.|::..:|:|:|..:
 Worm   193 AVPNTVFGQATSLAAF-FEGQPLDGILGLAFKSIAVDQITPPFINAI-NQNLVDLPLFTVFLEHE 255

  Fly   211 PRE-------IVFGGFDESKFEGKLHYVPVSQWHTWSLQISKSSVGTKQIGGKSNAILDTGTSLV 268
            ..:       ..:||.|.......:.|.|:|....:..::|....|:.........|.||||||:
 Worm   256 GDQNGVQGGVYTYGGIDTKNCGPVIAYQPLSSATYYQFKMSAIGSGSYHSSKGWQVISDTGTSLI 320

  Fly   269 LVPQQTYHNLLNTLSAKLQNGY--FVVACKSGSLPNINILIGDKVFPLTSSDYIMEVLLDRKPAC 331
            ..|:.....:.:.:.|..::.|  :::.| |..:..::|.||::|:.:.||:.|:. |.|....|
 Worm   321 GGPKAYVSAIADAVGATWRDDYGVYILPC-SAKINTLDITIGNQVYNIDSSNTIIP-LGDGSNNC 383

  Fly   332 VLAIAPINRG----FWVLGDIFLRRYYTVFDATEKRIGLAKA 369
            :.||.|.:.|    .|:|||.|:|:|..::|...:|:|.||:
 Worm   384 IYAIFPFSSGGFGPSWILGDPFIRQYCNIYDVGTQRVGFAKS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 102/368 (28%)
Asp 63..369 CDD:278455 102/367 (28%)
asp-2NP_872129.1 Asp 73..424 CDD:365818 101/354 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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