DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and Bace

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001285756.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster


Alignment Length:380 Identity:130/380 - (34%)
Similarity:201/380 - (52%) Gaps:24/380 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLRVLCFLLAFLSLVFATQKILKVPLYVRRSFNESEVFLARSATEGGETLQLQLL-------LQT 58
            |.:.:..::...:|  |:.::.:||:...::|.::...:....:......||..|       |..
  Fly     1 MFKTIAVVVLLAAL--ASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQLSN 63

  Fly    59 HNNMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSVNCPMSNSACQNHRKYNSSRSSSYIPDGRNF 123
            ..||.|||.|::|.|.|:|.|:||:||||.|:||..|  .:.||..|.:|:||.||:|:.:|.:|
  Fly    64 SMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTC--KSDACLTHNQYDSSASSTYVANGESF 126

  Fly   124 TLRYGSGMVVGYLSKDTMHIAGAELPHFTFGESLFLQHFAFSSVKFDGLVGLGLGVLSWSNTTPF 188
            :::||:|.:.||||.||:.:.|..:...||.||.......|:...|||::|:....|:.....|.
  Fly   127 SIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPP 191

  Fly   189 LELLCAQRLLEKCVFSVYLRRDPR-----EIVFGGFDESKFEGKLHYVPVSQWHTWSLQISKSSV 248
            ...:.:|.|::..|||.||.||..     |::|||.|.|.:.|.|.|||:|:...|...::.||:
  Fly   192 FYNMVSQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQFTMAGSSI 256

  Fly   249 GTKQIGGKSNAILDTGTSLVLVPQQTYHNLLNTLSAKLQNGYFVVACKS-GSLPNINILIGDKVF 312
            ....:.....||.||||||::.|...|..|...|:.. ::||  :.|.| .|||::...||...|
  Fly   257 DGYSLCDDCQAIADTGTSLIVAPYNAYITLSEILNVG-EDGY--LDCSSVSSLPDVTFNIGGTNF 318

  Fly   313 PLTSSDYIMEVLLDRKPACVLAIAPINRGFWVLGDIFLRRYYTVFDATEKRIGLA 367
            .|..|.||::    ....|:.|...:...||:|||:|:.:|||.||....|||.|
  Fly   319 VLKPSAYIIQ----SDGNCMSAFEYMGTDFWILGDVFIGQYYTEFDLGNNRIGFA 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 120/313 (38%)
Asp 63..369 CDD:278455 118/311 (38%)
BaceNP_001285756.1 pepsin_retropepsin_like 59..369 CDD:299705 120/318 (38%)
Asp 68..371 CDD:278455 118/311 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455535
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1619495at2759
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1428
SonicParanoid 00.000 Not matched by this tool.
98.930

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