DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and sxa1

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001342952.1 Gene:sxa1 / 3361468 PomBaseID:SPAC26A3.01 Length:533 Species:Schizosaccharomyces pombe


Alignment Length:416 Identity:97/416 - (23%)
Similarity:168/416 - (40%) Gaps:100/416 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 YVRRSFNESEVFLARSATEGGETLQLQLLLQTHNNMEYYGTIAMGNPRQNFTVIFDTGSSNTWLP 91
            :|.|....::|...|.:: |...|.|:..    :...|:..:.:|:..:.:::..||||..||:.
pombe    44 HVARKLERTKVLNKRDSS-GYPVLDLEYT----DAGGYFANLTLGSNERVYSLTLDTGSPYTWVT 103

  Fly    92 SVN----------------------CPMSNSACQNH----------RKYNSSRSSSYIPDGRNFT 124
            :.|                      ..:..:||.|:          |:.|||........|.|.|
pombe   104 AKNITALSASEIWSDTDGVDAGRSTSDIRTNACTNYTCFDYSSTTARRTNSSTIGFLASYGDNTT 168

  Fly   125 LRYGSGMVVGYLSKDTMHIAGAELPHFTFGESLFLQHFAFSSVKF-DGLVGLGL-----GVLSWS 183
                   |:||...|..:.||..||.|.||  |..:.:..|.:.. .|::||.:     |:.|..
pombe   169 -------VLGYNMVDNAYFAGLTLPGFEFG--LATREYDSSQISVTPGIIGLSVAMTITGISSDD 224

  Fly   184 NTTPF-----LELLCAQRLLEKCVFSVYLRRDPREIVFGGFDESKFEGKLHYVPVSQW------- 236
            ....|     ::.|.:..:::...|.:||..|..|::|||:|::|..|.:|:|.:|..       
pombe   225 KVVAFTPPTIVDQLVSANVIDTPAFGIYLNEDVGELIFGGYDKAKINGSVHWVNISSSDDSTFYS 289

  Fly   237 ----------HTWSLQISKSSVGTKQIGGKSNAILDTGTSLVLVPQQTYHNLLNTLSAKL-QNGY 290
                      .|.|..:..|...:|.|...:...|||||..:.:|:.|..::.:.....: :.||
pombe   290 VNLESITVTNSTSSNNVQSSKRSSKDIEVNTTVTLDTGTVYIYLPEDTVESIADQYQGIVSEYGY 354

  Fly   291 FVVACKS-----------GSLPNINILIGDKVF---PLTSSDYIMEVLLDRKPACVLAIAPINRG 341
            .|:.|.|           ||..:.::.:.|.|.   ..||.|           .|.||:...:..
pombe   355 VVIYCDSFSDSDYISFNFGSDADFHVSVNDLVIYRQESTSGD-----------ICYLALFEGDTS 408

  Fly   342 FWVLGDIFLRRYYTVFDATEKRIGLA 367
            .::||..||:..|:::|...::||||
pombe   409 SYLLGQYFLQYVYSIYDWDAQKIGLA 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 90/382 (24%)
Asp 63..369 CDD:278455 90/380 (24%)
sxa1NP_001342952.1 Asp 75..436 CDD:306525 90/380 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 1 1.000 - - otm47413
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1428
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.950

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