DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and asp-16

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_741674.1 Gene:asp-16 / 260226 WormBaseID:WBGene00012682 Length:395 Species:Caenorhabditis elegans


Alignment Length:398 Identity:109/398 - (27%)
Similarity:193/398 - (48%) Gaps:42/398 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LCFLLAFLSLVFATQKILKVPLYVRRSF-------NESEVFLARSATEGGETLQL----QLLLQT 58
            |.||| || :.|.:..:|::|.....|.       .:.:.|||  :.......||    |.|:..
 Worm     3 LVFLL-FL-VPFCSAAVLQLPTKSTGSLRAKLIQAGKYQEFLA--SQHAARLQQLNTGSQPLIDY 63

  Fly    59 HNNMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSVNCPMSNSACQNH-------RKYNSSRSSSY 116
            :::| |...|.:|.|.|..:|:.||.|:|.|:....|  ::.||..:       :|:|.::||::
 Worm    64 YDDM-YLANITVGTPPQPASVVLDTASANLWVIDAAC--NSQACNGNPGSGYTKQKFNPNKSSTF 125

  Fly   117 IPDGRNFTLRYGSGMVVGYLSKDTMHIAGAELPHFTFGESLFLQHFAFSSVKFDGLVGLGLGVLS 181
            :...|.|:::||||...|||..|.:.:.|..:....||.:..|.. ...|...||:.|||...:|
 Worm   126 VKGTRRFSIQYGSGTSSGYLGTDVLQLGGLTVKAQEFGVATNLGS-VLGSEPMDGIFGLGWPAIS 189

  Fly   182 WSNTTPFLELLCAQRLLEKCVFSVYLRRDPRE--------IVFGGFDESKFEGKLHYVPVSQWHT 238
            ....||.::.|.:|:.|:..:||:::.|..:.        |.:|..|....:.:::||.:|....
 Worm   190 VDQVTPPMQNLISQKQLDAPLFSIWVDRKLQVSQGGTGGLITYGAVDTKNCDAQVNYVALSSKTY 254

  Fly   239 WSLQISKSSVGTKQIGGKSNAILDTGTSLVLVPQQTYHNLLNTLSAKLQNGY--FVVACKS-GSL 300
            |...:...::|...:..:..||.|||::.:.:|....:.::....|.....|  :.:.|.: .:.
 Worm   255 WQFPMDGVAIGNYAMMKQEQAISDTGSAWLGLPNPVLNAIVQQTKATYDWNYEIYTLDCSTMQTQ 319

  Fly   301 PNINILIGDKVFPLTSSDYIMEVLLDRKPACVLA-IAPINRGF---WVLGDIFLRRYYTVFDATE 361
            |::...||...:|:.|.:||:::.|. ...|||| ::..|.||   :|||.:|:|::..|:|...
 Worm   320 PDLVFTIGGMQYPVKSIEYILDLGLG-NGRCVLAMLSYSNTGFGPSYVLGHVFIRQFCNVYDIGN 383

  Fly   362 KRIGLAKA 369
            .|||.|.|
 Worm   384 ARIGFANA 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 90/328 (27%)
Asp 63..369 CDD:278455 90/327 (28%)
asp-16NP_741674.1 Asp 68..391 CDD:365818 90/326 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162083
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S917
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D270366at33208
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.800

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