DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5860 and yps1

DIOPT Version :9

Sequence 1:NP_650622.1 Gene:CG5860 / 42095 FlyBaseID:FBgn0038506 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_588035.1 Gene:yps1 / 2538927 PomBaseID:SPCC1795.09 Length:521 Species:Schizosaccharomyces pombe


Alignment Length:442 Identity:102/442 - (23%)
Similarity:174/442 - (39%) Gaps:111/442 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLCFLLAFLSLVFATQ----KILKVPLYVRRSFNESEVFLARS----ATEGGETLQLQLLLQTHN 60
            :|.| .:|:.||.:.|    .:|.:. :|.::|...|..|.:.    :..|..:..|.|...|: 
pombe     5 ILIF-FSFIKLVSSLQYTGNGVLALD-FVAKTFPNQENQLEKRDYTYSPSGITSFPLDLQSYTY- 66

  Fly    61 NMEYYGTIAMGNPRQNFTVIFDTGSSNTWLPSVN---------------------------CPMS 98
               |..|:::|.|..::||..|.....|||...|                           |...
pombe    67 ---YTTTLSIGRPSISYTVAIDLDMPYTWLTYYNVMAFNPAYLGIVNSGTQWSTDELRYFLCKKE 128

  Fly    99 NSACQNHRKY--NSSRSSSYIPDGRNFTLRYGSGM-VVGYLSKDTMHIAGAE-LPHFTFGESLFL 159
            :.:|     |  |:|.|..::.....|.:||...: |.|...:|::..:..: ||.|.||.:| .
pombe   129 SDSC-----YFGNASSSFHFVTSPSTFFIRYDDNITVAGINVQDSLSYSHYQALPDFQFGITL-K 187

  Fly   160 QHFAFSSVKFDGLVGLGL-----------GVLSWSNTTPFLELLCAQRLLEKCVFSVYL-RRDPR 212
            ::...|.:.:.|::||..           .:.|:|..| |||.|..:.:|....||:|| .:...
pombe   188 EYVPSSMLPYKGVLGLAASTEINSIDYSDSISSFSPPT-FLEQLVKEDILAYPAFSMYLDNQGNG 251

  Fly   213 EIVFGGFDESKFEG--------KLHYVPVSQWHTWSLQ------ISKSSVGTKQIGGKSNAILDT 263
            .::.|..|.||::|        ||.:..||   .:|:|      .|..|:.|       :|...|
pombe   252 SLLLGAVDTSKYQGQFVALKQTKLTHYAVS---IYSVQFLNSTFFSNYSIIT-------DAYFQT 306

  Fly   264 GTSLVLVPQQTYHNLLNTLSAKLQNGYFVVAC-----------KSGSLPNINILIGDKVFPLTSS 317
            ..:.:.:|.:..:::::...|.|..|||.:.|           :.|....|.:.|...|....|:
pombe   307 RETYIYLPAELAYSVMDNAGAYLSEGYFALNCDEIDLEAALIFQFGCNSTIKVPISLLVIGQVSN 371

  Fly   318 DYIMEVLLDRKPACVLAIAPINRGFWVLGDIFLRRYYTVFDATEKRIGLAKA 369
                        .|:|.|.|......|||.:|.|..||.:..::|.|.:.:|
pombe   372 ------------ICLLGIRPSTDSEIVLGLLFFRNAYTFYHQSQKMIAIGQA 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5860NP_650622.1 pepsin_retropepsin_like 61..368 CDD:299705 86/374 (23%)
Asp 63..369 CDD:278455 86/373 (23%)
yps1NP_588035.1 Asp 66..411 CDD:278455 86/377 (23%)
pepsin_retropepsin_like 150..411 CDD:299705 69/284 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I1884
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I1684
OMA 1 1.010 - - QHG53248
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 1 1.000 - - otm47413
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1428
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.900

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